| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1390 |
|---|
| Symbol | nhaA |
|---|
| ID | 6368484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1426430 |
|---|
| End bp | 1427605 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642676792 |
|---|
| Product | pH-dependent sodium/proton antiporter |
|---|
| Protein accession | YP_001951631 |
|---|
| Protein GI | 189424454 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3004] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000519432 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGAC TCAAGGAATT TTACGAACAA GAATCATTCA CCGGCATCCT GTTGATGCTG
GTCACAATAG CGGCCCTGCT GCTGAAAAAC TCTCCCCTTG CCGAGGTCTA CAACAGTTTT
CTGCACACAC CGGTAGCTGT TCAGTTCGGG GCCTTGAAGA TTGCCAAGCC ACTGCTGCTC
TGGATCAATG ACGGCCTGAT GGCTGTTTTC TTCCTGCTGG TGGGGCTTGA GGTCAAGCGC
GAACTGATCC GGGGCAACCT CTCTTCCTGG AATCAAGCGG CCCTGCCGGT CATTGCCGCC
ATTGGCGGTA TGCTGGTGCC GGCCCTGATC TATGTCGGCT TCAATCACCA AGAACCAGCA
TCCCTGCATG GCTGGGCCAT CCCCACGGCA ACCGACATCG CCTTTGCCCT GGGTATCCTG
TCGTTATTGG GTAACCGGGT GCCGGCTTCA TTGAAGATAT TCCTGCTGGC GCTGGCAATT
ATTGACGATC TGGGCGCCAT TGTGATCATC GCCCTCTTCT ATACCTCTGA CCTATCACTG
GCTTCCATTG CCGTTGCCTC AGTCACCTTG CTGGCCCTGT TTGCACTCAA CCGCTTTGGC
GTAGAACGCA GGGCGGCCTA TATCCTTTTG GGTGCCGTAC TATGGGTCAG TGTGCTGAAA
TCCGGTGTCC ACGCCACCCT GGCCGGCGTG GCACTGGCCT TCATGATTCC CCTTGAGACC
CGTAGCGCAA AAACAGGCAA AAAGGCCCTG GCTGCCCAAC TGGAACATGA TCTGCACCCG
TGGGTTTCGT TTATGATCCT GCCGCTGTTC GCCTTTGTGA ATGCCGGGAT TGACCTGCGC
GGCCTGTCGC TGAACCAGCT GGCCACCCCG GTGCCGCTGG GGATCATGCT GGGGCTGTTC
ATTGGCAAGC AGGTCGGGGT CTTCGGGTTC AGCTGGCTTG CCATCAAAAG CGGGCTGGCA
CGCCTGCCGG CAACCAGTAA CTGGCGCCAG CTGTATGGTG TCTGCCTGAT GACCGGCATC
GGCTTTACCA TGAGCCTTTT CATAGACTCA CTGGCCTTTA CTGACGATGC TATCTACCAG
TACGCAGATA AACTGGCGAT TGTGCTGGGA TCACTGTTAT CCGGCGTAGC GGGCTACCTT
GTGCTGCGTT TTGGACCTTC AACACGTCAG ACCTGA
|
|---|
| Protein sequence | MQRLKEFYEQ ESFTGILLML VTIAALLLKN SPLAEVYNSF LHTPVAVQFG ALKIAKPLLL
WINDGLMAVF FLLVGLEVKR ELIRGNLSSW NQAALPVIAA IGGMLVPALI YVGFNHQEPA
SLHGWAIPTA TDIAFALGIL SLLGNRVPAS LKIFLLALAI IDDLGAIVII ALFYTSDLSL
ASIAVASVTL LALFALNRFG VERRAAYILL GAVLWVSVLK SGVHATLAGV ALAFMIPLET
RSAKTGKKAL AAQLEHDLHP WVSFMILPLF AFVNAGIDLR GLSLNQLATP VPLGIMLGLF
IGKQVGVFGF SWLAIKSGLA RLPATSNWRQ LYGVCLMTGI GFTMSLFIDS LAFTDDAIYQ
YADKLAIVLG SLLSGVAGYL VLRFGPSTRQ T
|
|---|
| |