Gene Glov_1346 details

Gene Information

• Locus tag: Glov_1346
• Symbol: rplC
• ID: 6369376
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: +
• Start bp: 1395365
• End bp: 1396000
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642676748
• Product: 50S ribosomal protein L3
• Protein accession: YP_001951587
• Protein GI: 189424410
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.700686
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAG GGATTATCGG AAAAAAGCTG GGCATGACCC AGATCTTCCT GGAAGATGGT 
ACCCGCGTTC CAGTAACGGT GGTACAGGCA GGGCCTTGTG TGGTGCTGCA GAAGAAGACA 
GCAGAAGTTG ATGGCTATTC AGCCGTTCAG GTTGGATTTG AAACTGTCAA TGCCGCTAAG 
GCAAACTCTG CGGACCGTGG GCATTGCGTC AAGGCAGGTA AAGGTGTGTT TCGGCATCTG 
CGTGAGCTGA AGCTGGAGCA AGAGGCCGAA CTGAATATCG GTGATGAACT AACCGTTCAA 
CAGTTTGAGC CAGGTGACCT GATAGATGTT ACGGGTACTA GTATCGGTAA AGGCTTTCAA 
GGTGTTATCA AGCGTCACAA CTTCAAGGGT GGCCGTGCCT CCCACGGTTC TCGCTTCCAC 
CGTGCACCTG GTTCTATCGG TTGTTCGGCA ACACCTTCAC GGGTTTTTAA GAACAAGAAG 
ATGCCGGGTC AGATGGGGAA TGAGCGCGTT ACTGTACAGC GTCTCCAGGT GGTTCGAGTT 
GATGCAGATC AGAATCTCAT CCTGATTAAA GGTGCGATTC CAGATTCCAA GAACAATGTC 
GTTGTCATTA AAGACAGCGT CAAAGCCACC AAGTAA 

 

Protein sequence

MNKGIIGKKL GMTQIFLEDG TRVPVTVVQA GPCVVLQKKT AEVDGYSAVQ VGFETVNAAK 
ANSADRGHCV KAGKGVFRHL RELKLEQEAE LNIGDELTVQ QFEPGDLIDV TGTSIGKGFQ 
GVIKRHNFKG GRASHGSRFH RAPGSIGCSA TPSRVFKNKK MPGQMGNERV TVQRLQVVRV 
DADQNLILIK GAIPDSKNNV VVIKDSVKAT K