Gene Glov_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_1330 
Symbol 
ID6366807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp1375372 
End bp1376229 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content50% 
IMG OID642676727 
ProductRNA polymerase, sigma 32 subunit, RpoH 
Protein accessionYP_001951571 
Protein GI189424394 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000387324 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGCCG CTATTCCGGT TACAACAGAT AGTTTTTCAA AATATCTGTC TGAAATAAAA 
TCTTTTCCAC TGCTTGATGA GCAGGAGGAA CATCGCTTGG CTGTGCGCCT GTTTGAAGAG
AATGATTTGA GTGCTGCGCA GACTCTGATT ACGTCAAACC TGCGCTTTGT TGTAAAGATA
GCTGCTGAGT ACCGTAACTA CGGACTTAAG ATGCTGGACT TGATTCAGGA GGGTAACATT
GGCCTGATGC TGGCGGTGAG AAAGTTTAAT CCGTACCGCG GATTCCGTTT GATTACCTAT
GCTGTGTGGT GGATCAGAGC GCAGATTCAA AGTTACATTG TTTCTTCATG GAGCCTGCTT
AAGATCGGCA CAACTCAGGC TCAGCGCAAA CTCTTCTTTA AATTGAAGCA GGCGAAGAAT
GCCATTCTTA GCATGAACGG TGGCGATGAG GGGGATCTGC CGGCAACTGC GCTTTCGCTT
GACGTCCGTG AGGCGGAGGT TGAAGAGATG GAGCTGCGCT TGATGGGCGA GGTCTCGCTG
GATGCGGAGC AGGTCGCTGG TGAAGGTGGG AGTCTTTTGG AGACTCTGGT TGATGACCGT
CCCAATCAGG AGAGCCAACT TGCGGATTTG CAGGAGCAGC AAGCCTTGAG GGTGGTTGTT
GCTGATGCCG TGTCACGACT TGGCGAGAAA GAGCAGTTTG TTGTCAAACA GCGAATCGTG
GCAGATGACC CCATGACGTT GCAGGAGATT GCAGACCACT TTTCAATATC ACGTGAGCGC
GTCCGCCAGA TTGAGGAAAA TGCGCTCAGG AAAATCAAGG GCTTTTTAGG GGCGAGCATG
CAACTCCAGC ACGTGTAA
 
Protein sequence
MYAAIPVTTD SFSKYLSEIK SFPLLDEQEE HRLAVRLFEE NDLSAAQTLI TSNLRFVVKI 
AAEYRNYGLK MLDLIQEGNI GLMLAVRKFN PYRGFRLITY AVWWIRAQIQ SYIVSSWSLL
KIGTTQAQRK LFFKLKQAKN AILSMNGGDE GDLPATALSL DVREAEVEEM ELRLMGEVSL
DAEQVAGEGG SLLETLVDDR PNQESQLADL QEQQALRVVV ADAVSRLGEK EQFVVKQRIV
ADDPMTLQEI ADHFSISRER VRQIEENALR KIKGFLGASM QLQHV