Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1330 |
Symbol | |
ID | 6366807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1375372 |
End bp | 1376229 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642676727 |
Product | RNA polymerase, sigma 32 subunit, RpoH |
Protein accession | YP_001951571 |
Protein GI | 189424394 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000387324 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGCCG CTATTCCGGT TACAACAGAT AGTTTTTCAA AATATCTGTC TGAAATAAAA TCTTTTCCAC TGCTTGATGA GCAGGAGGAA CATCGCTTGG CTGTGCGCCT GTTTGAAGAG AATGATTTGA GTGCTGCGCA GACTCTGATT ACGTCAAACC TGCGCTTTGT TGTAAAGATA GCTGCTGAGT ACCGTAACTA CGGACTTAAG ATGCTGGACT TGATTCAGGA GGGTAACATT GGCCTGATGC TGGCGGTGAG AAAGTTTAAT CCGTACCGCG GATTCCGTTT GATTACCTAT GCTGTGTGGT GGATCAGAGC GCAGATTCAA AGTTACATTG TTTCTTCATG GAGCCTGCTT AAGATCGGCA CAACTCAGGC TCAGCGCAAA CTCTTCTTTA AATTGAAGCA GGCGAAGAAT GCCATTCTTA GCATGAACGG TGGCGATGAG GGGGATCTGC CGGCAACTGC GCTTTCGCTT GACGTCCGTG AGGCGGAGGT TGAAGAGATG GAGCTGCGCT TGATGGGCGA GGTCTCGCTG GATGCGGAGC AGGTCGCTGG TGAAGGTGGG AGTCTTTTGG AGACTCTGGT TGATGACCGT CCCAATCAGG AGAGCCAACT TGCGGATTTG CAGGAGCAGC AAGCCTTGAG GGTGGTTGTT GCTGATGCCG TGTCACGACT TGGCGAGAAA GAGCAGTTTG TTGTCAAACA GCGAATCGTG GCAGATGACC CCATGACGTT GCAGGAGATT GCAGACCACT TTTCAATATC ACGTGAGCGC GTCCGCCAGA TTGAGGAAAA TGCGCTCAGG AAAATCAAGG GCTTTTTAGG GGCGAGCATG CAACTCCAGC ACGTGTAA
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Protein sequence | MYAAIPVTTD SFSKYLSEIK SFPLLDEQEE HRLAVRLFEE NDLSAAQTLI TSNLRFVVKI AAEYRNYGLK MLDLIQEGNI GLMLAVRKFN PYRGFRLITY AVWWIRAQIQ SYIVSSWSLL KIGTTQAQRK LFFKLKQAKN AILSMNGGDE GDLPATALSL DVREAEVEEM ELRLMGEVSL DAEQVAGEGG SLLETLVDDR PNQESQLADL QEQQALRVVV ADAVSRLGEK EQFVVKQRIV ADDPMTLQEI ADHFSISRER VRQIEENALR KIKGFLGASM QLQHV
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