Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1114 |
Symbol | |
ID | 6367589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1165519 |
End bp | 1167207 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642676509 |
Product | thiamine pyrophosphate protein TPP binding domain protein |
Protein accession | YP_001951356 |
Protein GI | 189424179 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCTG CGGAAGTGAT CGTCAGGTCT TTGGAAAAAC ATGGTGTTAC CTGTGTGTTT GGTGTCCCTG GCGGTGCTAT TGAGTCACTT AATACGGCCC TGTACAAGAG CTCGATCTCG GTGATTGTGG CAAAGCATGA GGAAGGGGCC GCTTTTATGG CTGATGGGTA TGCCCGGGTG AGCGGCGTTA TTGCGGTTTG TTGCAGTACT GCCGGTCCAG GGGCAACCAA TATGATTACC GGCATAGCCT CAGCTTTTGG AGACTCCATT CCGGTCATTG CGTTAACCGG TCAGGTCTCT ACCTCATTGT TCGGCAAGGG GGCCATTCAG GAATTTTCAG TTCAGAGCTT CGGCATTGTC AGCATTTTCC GGCAGATCAC CAAATACAGC GACATCATTA TAAATGAGAA CAAAGCGGGC GAGATGATCT CCAGGGCACG CCGGTTGGCC TTAACCGGCA GAAAGGGACC TGTCCATCTT AATCTTCCTG CCGATATCAT GAAGCGCAAG GTGACCGATG ACAGTCATGA ACGTTGCAGC ACTACGCAGG TGTTGGGGTT TGACAGGGAG GCCGTTAAAA AGGCTGCGCA ACTTCTTCTT GGTGCCAAGC GGCCGGTGAT AGTTGCCGGC TGGGGGACTG TCCTTTCACG GGCTGACAAA GAACTGTTGG AACTTGCCGA GCTGCTGGAT ATCCCTGTGG CTACATCGCC AAAAGCAAAG GGGATACTGA GTGAGGTGCA TCCGCTCTCA CTGGGGGTGC TTGGATTTGC GGGATCGCCG GTTGCGAAGG AATATATCCT CAAAAGGGAT GTTGATGTGC TGCTTGCGGT GGGCACCAGT TTCAATGAAT TTGTGACCTC GGGCTGGGAT AAACGGCTGC TGCCGATGAA GTCCTTGATC CATGTGGATA TTGACTGCAA TGAGATCGGC AAAAACTACT ATGTGCATGT CGGCATTGCA GGCGATGCTG CCACTGTTCT GCGTGAGCTT GTTTTTGAGA TAGGCAGAAT CAGGAAAGGC AGGCGTATAG AAAACACCAG GCGTAAAGAG GTTGAACAGG TCAGGGCCGC TTTGCTGGTA AAAACGAGAA AGCAAAATAA AGCATTGTAC AGTCCGCACC GCCTGATTAT GGACCTGAAC GAGGCCTTGC CAAAAAATAC GCTCTATTTT GCGGATAACG GCAACAGTAT GGCCTGGGCA ATTCGCTATT TGACGATAAC TGAACCCTAT TCATTTTATG TCGGCCTCGG TTTCGCCTCG ATGGGGTTTG CTGTCGCGGC GCCGATCGGG GCCAAGCTTG CAGCAGGAGA CAGGCCGGTT GTCGCCCTGG TGGGTGATGG TTCTTTCCTG ATGAACGGCA TGGAGGTCGC CACGGCAGTT AATTACAATA TTCCGGTTAT CTGGGTGATC ATGAATAACG CCATGCTGGG AATGGTGTAC CACGGCAGAA AGCTTGCCGG GATTCCGGAG GGGATTCCGT CAGGGTTTAA GCCGGTTGAC CATGTCAAAC TGGCAGAGGC ATTAGGCGCC CGGGGGATCA GAATTACGAC GCCGGGGGAA ATAAACCGGG AATTGATGGA TGACATACTT GCAGCCGGGG TTCCGACCGT ACTGGATGTC ATTATCGATC CGGAAGAGGT TCCACCCATA CATTCCCGCA TTTCTTCACT GGAAAAACTT TACACATGA
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Protein sequence | MNAAEVIVRS LEKHGVTCVF GVPGGAIESL NTALYKSSIS VIVAKHEEGA AFMADGYARV SGVIAVCCST AGPGATNMIT GIASAFGDSI PVIALTGQVS TSLFGKGAIQ EFSVQSFGIV SIFRQITKYS DIIINENKAG EMISRARRLA LTGRKGPVHL NLPADIMKRK VTDDSHERCS TTQVLGFDRE AVKKAAQLLL GAKRPVIVAG WGTVLSRADK ELLELAELLD IPVATSPKAK GILSEVHPLS LGVLGFAGSP VAKEYILKRD VDVLLAVGTS FNEFVTSGWD KRLLPMKSLI HVDIDCNEIG KNYYVHVGIA GDAATVLREL VFEIGRIRKG RRIENTRRKE VEQVRAALLV KTRKQNKALY SPHRLIMDLN EALPKNTLYF ADNGNSMAWA IRYLTITEPY SFYVGLGFAS MGFAVAAPIG AKLAAGDRPV VALVGDGSFL MNGMEVATAV NYNIPVIWVI MNNAMLGMVY HGRKLAGIPE GIPSGFKPVD HVKLAEALGA RGIRITTPGE INRELMDDIL AAGVPTVLDV IIDPEEVPPI HSRISSLEKL YT
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