Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1066 |
Symbol | |
ID | 6368576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1108731 |
End bp | 1111877 |
Gene Length | 3147 bp |
Protein Length | 1048 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642676461 |
Product | UvrD/REP helicase |
Protein accession | YP_001951309 |
Protein GI | 189424132 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases [COG2887] RecB family exonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAGAC TGACCACTGA TTTCAAAGCT GTCTATCAGC GGCTGAACCA GGCCCAGCGC AAGGCTGTGG ACACCCTTGA AGGTCCGGTG CTGGTGATTG CCGGTCCCGG AACCGGCAAG ACCGAGATCC TGGCGGCCCG GATCGCCAAT ATTCTGCTTT CCACCGATGC CACGCCGGAG AGTATCCTCT GTCTGACCTA CACCGATGCC GGTACCGTGG CGATGCGCAA CCGGCTGCTG CAGTTCATCG GTCCCAATGC CTACCGGGTG GATATCTTCA CCTTTCATGC CTTCTGCAAC CTGGTGATCC AGGAAAATGC CGATTATTTC GGCCTGCGCA GCCTGACCAC CATCTCGGAG CTGGAGCAGT TCCGTTTTGT GCGGGAGATC ATTGATGCCT TTCCCCATGA ACATCCCCTG ACCCGCTCCA CCGGCGATAT CCATTTTGAG TCGGACCGGT TACTGGCGCT GTACGAGATC ATGAAGAAGG AAGACTGGTC CGCCGACTGG CTGGCTGCCC GGGTGGATGC CTATGCCGCC ACCCTGCCGG ATAATCCTGA TTTTCTCTAC AAACGTCAGA CCAGGGCCAG TGACGGTACG GTCTATAAAA AAGGTGATCT GAACGAGCGG AAGCTGCGGG AGGAACTGCG AAAACTTGAG CAGTTGAAGG CAGCGGCCCG AAGTTTTGAT GACTACCAGC AGCTGCTGAA AGAGCGGGGA CGCTACGACT TTGCCGACAT GATCCTCTGG TGCAGTGCCG CCTTCAAACA GAATGCCGAC CTGCTGGCCA CGTATCAGGA ACGCTACCTC TACCTGCTGG TGGATGAATT TCAGGATACC AGCGGTTCCC AGTTTGAGCT GCTGATGCAG CTGGCTGATT ACTGGGATGC CCCCAACCTG TTTGTGGTGG GGGATGACGA CCAGTCGATC TTCCGCTTCC AGGGGGCCAG TGTCGAGAAC ATCCGGCGTT TTGTGGAGCG TTACCGTCCG TCACTTACCA CAGTTACCCT GACCGACAAC CACCGTTCCT CGCAGTTGAT TCTGGACGGG GCGGGGGCGT TGATCGGTCG TAATCAGGAA CGTCTGAGCG ATGAAAAACA GCTGATCGCC ATGAACCCGG AAGTGGCTGC ACTGCCGGAG CCGCCGCAAC TGGAGGGGTA CGCCACCCTG GCCCACGAGA CCGTGGCGAT TGCCAACCGG ATCGGGGCGC TGCTGGATGC CGGGGTGCTG CCGGAACAGA TCGCGGTGAT CTACCGCAAC CACAGCCAGT CAGAGGAGAT CATCCGTTAC CTGACGGCCC GCGGGGTGGC GGTACAGACC CGGCGGCGGG CCGATATCCT GCAGGAACCG CTGATTCTCA AGCTGATGAA CGTGCTGCGC TATCTGGCCA CTGAACTGGA ACGGCCCCAT TCCGGTGAAC GGCTGCTGTT TGAGATATTG CATGAACCCT GGTTCGGGGT ACCACCTCTG GCCCTGGCCA GGCTGTCGGT GGAGATCGCC CGGCAGCGGA CCGAGAAACG TCCCAGCTAC TGGCGTGAGC AGTTGCCGCT GCGGGGAATG GACAAGGGAC AACAGGCCCT GTTTCCGGCC AGCGATGACC TGCACCTGCG TCAGGCCGGC GAGACCATTG AAGAACTGCT GCGGGATGCT GCCACCATGA CCCTGCAGGA GCTGCTGCAC CATGTCATCA CCAGGCTGGG GATTCTGGCC CAGGCCCTGT CGGCCCACGA ACGGGTCTGG CATCTTGAAC TGCTGAACAC CCTGTTTGAC TTCGTGCGGG AGGAAACCGC CAAACAGCCG CTGTCGCTGC CCGAGCTGCT GGCCATGCTG GCTGATATGC AACGCCAGGG GATCAGTCTG GCCGTGGAAA AGCTCAGCTA TACCGGCGCC GGGGTCAACT TCCTGACCGC CCATGGCTCC AAGGGGTTGC AGTTTGACCA TGTCTTCATG CTGGGCTGTA CCCGTGGTGT CTGGGACAGT GCCTCCCGCA ACCGTACCTA CAGCATGCCC CCTACCATCT GGTCCGGCCC GGCCGGCAGT GAGGAGGAGG AATCGCGCCG TCTGTTCTAT GTGGCCATGA CCAGGGCCCG CAAACAGCTG GTGATCTCCT GGCCGGAGCG GGACAACAAG GAAAAAGAGC TGGAGAAGAG CCGTTTTGTG GCTGAACTGG CAGAAAGCGG GGGCGGCAGC ATCCGCCAGC ACGTGCTGAG TGACGACGAA CTGCTGGCCT TTGGCAATGC CGTGTTGCAG GCACTACCGG CACGGCTTCC TGCCGAACTG ATTGACGACG CCTTTGTGGA CAGTCTGCTG CAGAAGTATT CCCTCAGTGT CACCCACCTG AACAGCTATC TGCGCTGTCC GCTCTCCTTC TACTTCAACA CCCTGCTGCG GGTGCCGGCA CCGATGAGTT CTGCCCTGAC CTTCGGCTCG GCGGTTCATC ACGCCCTGGA ACAGCTCTTC CGCAAGATGA AGGCAGATCC GGCCGGACGG TTTCCCACTG CGGATGTCTT TGTGGAGGAT TTCCGCTGGT TCATGCGTCG GCACGAGGAG GGCTTTACCC CGGCAGAGTT CAGGCGCAGG CTGGAGTATG GCGAGACGAT CCTGCCCGGC TTTTACGCTG CCCACCATGC CGGCTGGAAA CGGGATGCGC TGGTTGAGTA CCCCTTCCGC AACATCCTGA TGGACGGTAT CCCGCTGAAC GGCAAACTGG ATATGCTGGA GTTTTCGGGC AACCATGTCA CGGTGGTGGA CTACAAGACC GGCAACCCCC AGAATGCGCG CAAGAAGCTG AATCCGCCCG ACCCGGAGAA GGTCGCCAAG GCGCTGGCTG AAGGCAGGGA ACCGCATGAT GATGACCGGC TGGGCGGTGA TTACTGGCGA CAGGCGGTCT TCTACCGGAT TCTGGTGGAA CATGAGCCAC GCCGCAGCTG GGTGATGACC TCGGCCCGCT TCGAGTTTGT AGAGCCGGAA AAGGAAAGCG GCGAATTCCG GTCGGCCCGC TTTGAGGTCT CGGATGATGA GGTGGCCCAG GTCAGGCAGC AGGTCAAAGA GGTCTACGCA AAGATTCAGG CCAAACAGTT TCACAACGGT TGCGGCAAAC CGGAATGTGA ATGGTGCAGC TTTGTAAAGC GGTTTGAAGG ACGCTGA
|
Protein sequence | MNRLTTDFKA VYQRLNQAQR KAVDTLEGPV LVIAGPGTGK TEILAARIAN ILLSTDATPE SILCLTYTDA GTVAMRNRLL QFIGPNAYRV DIFTFHAFCN LVIQENADYF GLRSLTTISE LEQFRFVREI IDAFPHEHPL TRSTGDIHFE SDRLLALYEI MKKEDWSADW LAARVDAYAA TLPDNPDFLY KRQTRASDGT VYKKGDLNER KLREELRKLE QLKAAARSFD DYQQLLKERG RYDFADMILW CSAAFKQNAD LLATYQERYL YLLVDEFQDT SGSQFELLMQ LADYWDAPNL FVVGDDDQSI FRFQGASVEN IRRFVERYRP SLTTVTLTDN HRSSQLILDG AGALIGRNQE RLSDEKQLIA MNPEVAALPE PPQLEGYATL AHETVAIANR IGALLDAGVL PEQIAVIYRN HSQSEEIIRY LTARGVAVQT RRRADILQEP LILKLMNVLR YLATELERPH SGERLLFEIL HEPWFGVPPL ALARLSVEIA RQRTEKRPSY WREQLPLRGM DKGQQALFPA SDDLHLRQAG ETIEELLRDA ATMTLQELLH HVITRLGILA QALSAHERVW HLELLNTLFD FVREETAKQP LSLPELLAML ADMQRQGISL AVEKLSYTGA GVNFLTAHGS KGLQFDHVFM LGCTRGVWDS ASRNRTYSMP PTIWSGPAGS EEEESRRLFY VAMTRARKQL VISWPERDNK EKELEKSRFV AELAESGGGS IRQHVLSDDE LLAFGNAVLQ ALPARLPAEL IDDAFVDSLL QKYSLSVTHL NSYLRCPLSF YFNTLLRVPA PMSSALTFGS AVHHALEQLF RKMKADPAGR FPTADVFVED FRWFMRRHEE GFTPAEFRRR LEYGETILPG FYAAHHAGWK RDALVEYPFR NILMDGIPLN GKLDMLEFSG NHVTVVDYKT GNPQNARKKL NPPDPEKVAK ALAEGREPHD DDRLGGDYWR QAVFYRILVE HEPRRSWVMT SARFEFVEPE KESGEFRSAR FEVSDDEVAQ VRQQVKEVYA KIQAKQFHNG CGKPECEWCS FVKRFEGR
|
| |