| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1027 |
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| Symbol | thyX |
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| ID | 6369004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 1067875 |
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| End bp | 1068567 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642676422 |
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| Product | FAD-dependent thymidylate synthase |
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| Protein accession | YP_001951270 |
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| Protein GI | 189424093 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00194248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATCG AACTGCTGCA TTATACCCCT GAACCTGAAC GGACCGTTGC CCTGGCGGCC
CGGCTCTGCT ATTCCCCCAC CGGGCTGAAT GAACTGAAGG AAAAGATCGG TAGCGGGGAT
ATTCGTCAGT TCATCGACAA GATCATGACG CTTGGCCATC ACTCCGTTCT GGAGCATGCC
TCCTTTACCT TCGGGGTGGA AGGGATCTCG CGGGTTACCT CCCACCAGCT GGTGCGCCAC
CGGGTGGCCT CCTATTCCCA GCAATCCCAA CGCTATGTCT CCCATGTTGA GCGCTTTGAT
GCCGTACTGC CTCCTTCAAT CGCTGCCAAT GAAGAGGCGA AACGGATTTT TGATTTTACC
GTCGGCGTGG TGCATCAGGC CTACAAACAG CTGGTGGAGA TGGGGCTTCA ACCGGAAGAT
GCCCGCTATC TGCTGCCCAA TGCCACTGAA ACCAAGATCA TCATCACCAT GAATGCCCGT
GAACTGCTGC ATTTCTTCAG ATTGCGCTGT TGTGAGCGGG CCCAATGGGA GATCAGGAGC
ATGGCGGTGG GGATGCTGAA GCTGGCCAAG CAGGCCGCCC CCACCATCTT CCGTGATGCC
GGCCCCGGCT GCGTTGCCGG TCCCTGTCCG GAAGGTGAAT TCTGCTGTGG CCGTACGGCC
CAGGTGCGTA AGCAGTTCAG GAGTCTTACC TAA
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| Protein sequence | MNIELLHYTP EPERTVALAA RLCYSPTGLN ELKEKIGSGD IRQFIDKIMT LGHHSVLEHA
SFTFGVEGIS RVTSHQLVRH RVASYSQQSQ RYVSHVERFD AVLPPSIAAN EEAKRIFDFT
VGVVHQAYKQ LVEMGLQPED ARYLLPNATE TKIIITMNAR ELLHFFRLRC CERAQWEIRS
MAVGMLKLAK QAAPTIFRDA GPGCVAGPCP EGEFCCGRTA QVRKQFRSLT
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