| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0878 |
|---|
| Symbol | |
|---|
| ID | 6369170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 903199 |
|---|
| End bp | 905841 |
|---|
| Gene Length | 2643 bp |
|---|
| Protein Length | 880 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642676274 |
|---|
| Product | CBS domain containing protein |
|---|
| Protein accession | YP_001951122 |
|---|
| Protein GI | 189423945 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase
[COG0618] Exopolyphosphatase-related proteins
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGG TTATCTCACA CCTGAATGCT GATTTTGACT GTCTGGGCTC CCTGGCCGCT
GCTGCGCGGC TGTATCCGGG AGCCCTGCTC TCGTTTCCCG GCTCCCAGGA AAAGAATCTG
CGTGAGTTCT GCGCCCGTCA CCCAGATCTG CTTCCCCCGC TTGTCCGCTC AAAGGATATC
GATCTCTCCC GTGTCACCCG CCTGATTGTT GTTGATTGCC AGCAGGGCTC CCGGATCGGC
CGCTTTGCCG AGCTGTTGGA ACGGCCCGGT CTGACGGTCC ACCTCTATGA TCATCATCCG
GCCACTGCTG ACAGTATCAG CGCATCGGGC GGGGTTGTCC GGTCGGTCGG CGCCACTGCC
ACCATCATGA CTGAGCTGCT GCGGGAACGG GGTATGGAGC CAACCCCTGC AGAGGCAACC
CTGCTGTTGC TGGGCATCCA TGAAGACACC GGACGGCTGC TGTTTCCCAC CACGACGCCG
GAAGACTATC GTGCTGCCGC CTGGCTGCTG GAGCGGGGCG CACGCCTGCA TCTTGCCGAC
GAGATCTTGT CGCCCGAGCT GACCACCCCG CAGGTGGAGC TGCTGCATGA TCTGCTCTCA
ACACTGAAGA CCAGTGAGGT CAGCGGGGTA CGGCTCTCCG TGGCCCATGC CAGCCGCCCC
TGGTATGTCG GGGATATTGC CGGGCTGGCC CACATGATGC GGGATATGGA AAACCTGGAC
CTGCTGGTGC TGGTGGTGGC CATGGCGGAC CGGGTCTACC TGGTGGCCCG CAGCCGCGTG
CCTGAGGTGG ATGTGGGGGA GTTGCTACGT CTCTTTGGCG GCGGCGGGCA TGCCTCGGCT
GCCTCGGCAA CGGTCAAGGG TGAAGCGCTG TCCGTTGTGC TGGAACGGCT GGAACGGAAC
CTGCTGCTAA TTGTGCATCC CCGCAAGACC GTGGGACAGA TTATGTCATC ACCGGTCCGC
AGCCTGTCCA GTGCCACCAC GGTACGGGGA GCCCGGGACC TGCTGGTGCG CTACAACTAC
AGCGCCATGC CGGTGCTGCA GGGGGAGCAG CTGCTGGGGA TCATCACCCG CAAAGTGGCG
GAAAAGACCG TCTATCATGG TCTTGGCGAC CGGCCGGTAA CCGAGGTGAT GCACACCGCG
GTGATGCGTG CCACCCCGGA GACTCCGCTT GCCACGGTGA TGGACCATAT GGTGGGTGGC
GACCGCCGTT TCGTGCCGGT CTTCGACGGT GAAAAACTGG TGGGGGTGGT GACCCGCACC
GACCTGCTGC GTCATCTGCA CGGCGCGAGC CAGGATGGTG AGAGCCTGTA CGACCTGGAA
CGGCTTTCTC CGGAACCAAA GGAACGGGAA CTGGCCACAC TGCTCAGAAG GCGCTTGCCC
GCAGATTCAG TGCAACTGCT GGAGCTGCTG GGCAAGAGCG GTGATGCGCT GGGGGTGGCG
GTGCATGCGG TGGGTGGTTT TGTGCGGGAT CTGCTGTTGG ATGTTCCCAA TCTTGATCTT
GACATTACGG TGGAGGGGGA CGGTATCTTT TTTGCCGAGA CCTTTGGCGA GCAGCATGGC
TGCCGGGTCC GGCCCCACCA GGCCTTTGGC ACTGCAGTGG TGGTCTTTCC CGATGGCCGC
AAGCTGGATG TGGCCAGCAC CCGGCTGGAA TATTACGATT CACCCGGTGT CTTGCCTACG
GTGGAACGGG CCTCGCTGCG CCATGACCTC TATCGCCGCG ACTTTACCAT CAATACCCTG
GCGCTCTGCC TGAATACCAA TCGTTTCGGC CTCCTGCTGG ATTTTTTTGG CGTCCAGAAG
GATCTGCAGG AGAAGGCGGT ACGGGTGCTG CACAACCTTT CCTTTGTGGA GGATCCGACC
CGGGCCTTCC GGGCGATCCG CTTTGAACAG CGGCTGGGCT TTCAGCTTGA TCCCCACACC
GAAGGTCTGC TGCGTTCTGC CGTGCGGGCC GGGCTGGTGG AGCGGGTCGG GGGCAAACGT
CTGCTGGGGG AACTGATTCA GATCCTGAAA GAACAGGAGC CGGTGCCGGC GGTCAAGCGG
ATGGCCCAGC TGGGGTTGTT GCCCTGCATC CACAGCGAGC TGCGTTTCGG CCCTGACAGT
GAACAGCTGT TTGCCGAGCT TGAGCGGGTG CTGGCCTGGT ACCAGCTGCT CTATCTGGAT
ACGCCGCTTG AGCCGTGGAC GGTCTGGTTT CTGGCCCTGA TGGACCGCCT TGATTCTCCC
CGCTATCTGG AGGCCTGTCG GCGCCTGATG ATGCCGGAAC GCCTGATGGA ACGAGTTTTC
GGGCATCGTC ACCAGGCCCT GAAACGTCTG CAGCATCTGC GGCAGATGCT GGGGCATGGG
CAGGAAATCT CCAACAGCCA GCTCCATGCC GGTCTGCACG GCATGCCGGT GGAGCTGCTG
CTGTACGGCC TGGCCCGTAG TGGCAAGGAG GATCTGCGGC GGTTGGTCTC GCACTACCTG
ACCAGACTTG CCGACGCAAA GGCTCTGGTC AGCGGTACCG AGCTGCAGGC CTTGGGAGCG
GCCCGCGGAC CTGCCATCCG CAGCCTCAAG GAGCAACTGC TGGCGGCACG GCTGGATGGC
TTGATCGCTT CAAAGGATGA AGAGCTGGCA TTGGCCAGGC AGCTGATAGC AGACCAGTCC
TGA
|
|---|
| Protein sequence | MDLVISHLNA DFDCLGSLAA AARLYPGALL SFPGSQEKNL REFCARHPDL LPPLVRSKDI
DLSRVTRLIV VDCQQGSRIG RFAELLERPG LTVHLYDHHP ATADSISASG GVVRSVGATA
TIMTELLRER GMEPTPAEAT LLLLGIHEDT GRLLFPTTTP EDYRAAAWLL ERGARLHLAD
EILSPELTTP QVELLHDLLS TLKTSEVSGV RLSVAHASRP WYVGDIAGLA HMMRDMENLD
LLVLVVAMAD RVYLVARSRV PEVDVGELLR LFGGGGHASA ASATVKGEAL SVVLERLERN
LLLIVHPRKT VGQIMSSPVR SLSSATTVRG ARDLLVRYNY SAMPVLQGEQ LLGIITRKVA
EKTVYHGLGD RPVTEVMHTA VMRATPETPL ATVMDHMVGG DRRFVPVFDG EKLVGVVTRT
DLLRHLHGAS QDGESLYDLE RLSPEPKERE LATLLRRRLP ADSVQLLELL GKSGDALGVA
VHAVGGFVRD LLLDVPNLDL DITVEGDGIF FAETFGEQHG CRVRPHQAFG TAVVVFPDGR
KLDVASTRLE YYDSPGVLPT VERASLRHDL YRRDFTINTL ALCLNTNRFG LLLDFFGVQK
DLQEKAVRVL HNLSFVEDPT RAFRAIRFEQ RLGFQLDPHT EGLLRSAVRA GLVERVGGKR
LLGELIQILK EQEPVPAVKR MAQLGLLPCI HSELRFGPDS EQLFAELERV LAWYQLLYLD
TPLEPWTVWF LALMDRLDSP RYLEACRRLM MPERLMERVF GHRHQALKRL QHLRQMLGHG
QEISNSQLHA GLHGMPVELL LYGLARSGKE DLRRLVSHYL TRLADAKALV SGTELQALGA
ARGPAIRSLK EQLLAARLDG LIASKDEELA LARQLIADQS
|
|---|
| |