Gene Glov_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_0843 
Symbol 
ID6367302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp866713 
End bp869694 
Gene Length2982 bp 
Protein Length993 aa 
Translation table11 
GC content58% 
IMG OID642676238 
Producttype I site-specific deoxyribonuclease, HsdR family 
Protein accessionYP_001951087 
Protein GI189423910 
COG category[V] Defense mechanisms 
COG ID[COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 
TIGRFAM ID[TIGR00348] type I site-specific deoxyribonuclease, HsdR family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCACCG AATCCAACAC CGTCGAAGCC TACCTCCGCG ACCTGCTGAC TGGTTCTGTC 
ATAGATACTA CACAAGGTGT AGTCAGTGAA CCGGAGCCGG TATACATCGT CGGCCGGGCA
ACCAAAGGTG TCGGCTGGCG GTATGTCTCC CCCCAGAAGC TCACCCGCCA GAGTAATGAA
GTTTTCGTTG AATCCTACCT CCGTGACGCC CTCATCCATC TAAATCCCGA AATCAAAGCT
CAACCCGACC GCGCTGATGA AGTGCTCTAC AAACTGCGGG CCATCGTGCT TTCCGTCCGC
TCCGACGGCC TGATCCGCGC CAACGAGGAG ATGACCGCCT GGCTGCGGGG CGAGCGCACT
ATGCCGTTCG GCCAGAACAA TGAGCATGTG CCGGTGCGGT TGATCGATTT CGAGAATCTG
GACAACAACC AGTATGTAGT GACGCAGCAA TATACATACC GGGCCGGGCA GATCGAAAAA
CGGGCCGACT TGATGCTGCT GGTCAACGGT CTGCCGTTGG TGCTGATCGA AGCCAAGACC
CCGGTGCGGA AGGCAACCAG TTGGGTGGAC GGGGCGCTGC AGGTCCATGA GGATTATGAG
AAGTTCGTGC CGGAGCTGTT CGTCTGCAAT GTGTTCTCGG TCGCCAGCGA AGGGAAAGAA
TTCCGTTACG GTGCCATTGG TGTGCCGGTC AAGGATTGGG GGCCGTGGAA CCTGGATGAC
ACTACAACCA ACACCCAGCA TCATCCGCTG CACTCCCTCA AGTCGGCTGT CGAAAGCATG
CTCCGTCCCC ATATCGTGCT CGATATTCTG GCCAACTTCA CCCTGTTCGC AACCCACAAG
AAAAAGCAGC GCAGCAAGAT CATCTGCCGT TACCAGCAGT ACGAGGCCGC CAATCGCATT
GTCGAGCGTG TGCTGGCTGG GGCTCCCCGC AAAGGGCTGA TCTGGCATTT CCAGGGGTCC
GGCAAGTCGC TGCTGATGGT CTTTGCCGCC CAGAAACTGC GCCTGCATCC CAAGCTGAAG
AATCCGACCG TGCTGATCGT GGTTGACCGC ATCGACCTCG ATACCCAGAT CACCGGCACC
TTCACCGCCG CCGACATCCC GAACCTGGAA AAGGCCGAGT CCCGCGAGAA GCTGCAAAAG
CTGCTGGGGC AGGATGTCCG CAAGATCATC ATTACCACCA TCTTCAAGTT CGGCGAGGCG
GATGGCGTCC TGAACGAACG GTCAAACATC ATTGCCCTGG TGGATGAGGC CCACCGCACC
CAGGAAGGTG ACCTGGGGCG CAAGATGCGC CAGGCTCTTC CCAATGCGTT TCTCTTCGGC
CTCACCGGCA CCCCGATCAA CCGGAGCGAC CGCAATACCT TCTATGCCTT TGGCGCCGAG
GAAGACACCG GCGGCTACAT GAGCCGCTAT GGTTTCGAGG AGTCGATCCG GGACGGCGCC
ACCCTGCCGC TGCATTTCGA GCCCCGGCTG GTGGAGCTGC ATATCGACAA AGAGGCCATC
GACGAAGCCT ATGCCGAACT GACCGGCGAC CTGTCCGACC TGGACCGGGA CAACCTCGCC
CGGGCAGCAT CGAAGATGGC CGTGCTGGTC AAGACGCCGG AGCGGGTCCA GCGGATCTGC
GCCGATATCG TGCAGCACTT CCAGTCCAAA ATCGAACCGA ACGGTTTCAA GGGGCAGATC
GTTACCTTTG ACCGGGAGTG CTGCCTGCTC TACAAACAGG AAATCGACAA GCTCCTGCCA
ACCGAGGTGA GCGAGATTGT CATGACGGTC AACAGCAATG AGCCGCAGTA CAAAGCCTAT
GCCCGCACCC GTGACGAAGA GGAGCGGCTG CTGGAGCGGT TTCGTGATCC CAATGACCCG
CTGCAGCTCA TCATCGTCAC TTCAAAACTG CTGACCGGCT TTGATGCCCC CATTCTCCAG
GCGATGTATC TGGACAAGCC GATGAAGGAC CACACGCTGC TGCAGGCCAT CTGCCGGGTC
AACCGCACCT ACGCCGACAC CAAGACCCAC GGCCTGATTG TCGATTATCT GGGCGTGTTC
GACGATGTGG CCAAGGCGTT GGAGTTTGAC GACAAGAACA TTCTCAAGGT GGTCTCCAAC
ATCCAGGAGT TGAAGAATCA GCTCCCGGAT GCCATGCAGC GCTGCCTGAC TTTCTTCATC
GGCGTGGATC GCACCCTGCA GGGATATGAA GGTCTGATCG CCGCGCAGCA GTGCCTGCCG
AACAACACCG TGCGCGATAA CTTCGCTGCC GAATTCAGCG TCCTCAACAA GCTGTGGGAG
GCGATTTCCC CGGACCCGAT GCTGAATCAG TACGAGACTG ATTACCGCTG GCTCTCCCAG
GTGTACCAAT CAGTGCAGCC GTCCAGCGGT CACGGAAAGC TGATCTGGCA TTCCCTTGGC
GCCAAGACCA TCGAACTGAT CCACCAGAAC GTCCACGTGG AAGCTCTGCG GGATGATCTG
GACACGCTGA TCCTCGATGC CGACCTGCTG GAAGCGGTGC TGTCCAACCC GGACCCAAAA
AAGGTGAAGG AGATTGAGAT CAAGATCTCT CGCCGACTGC GCAAGCACAT GGGTAATCCG
AAATTCAAGG CGCTGTCGGA ACGGCTGGAG GAATTGCGGA ACCGGCAGGA ACAGGGGCTC
ATTACCAGTG TCGAATTCCT GAAACAGCTG CTGCAACTGG CGAAAGACCT GCTGCAGGCG
GAAAAGGAGA CGCCGCCGGA AGAGGATGAG GATCGCGGCA AGGCGGCGTT GACCGAACTG
TTTCAGGATG TGAAGACCGA GGAAACCCCG GTCATGGTGG AACGGATCGT TGCCGATATT
GATGAGATTG TCCGGCTGGT ACGGTTCCCC GGCTGGCAGC ATACTCTGGC GGGTGAACGC
GAGGTCAAGA AGGCCTTGCG GAAATCACTC TTCAAATATC GGTTGCACCA GGACGAGGAA
CTTTTCGAAA AATCGTATGG GTATATCCGG CAGTATTACT GA
 
Protein sequence
MFTESNTVEA YLRDLLTGSV IDTTQGVVSE PEPVYIVGRA TKGVGWRYVS PQKLTRQSNE 
VFVESYLRDA LIHLNPEIKA QPDRADEVLY KLRAIVLSVR SDGLIRANEE MTAWLRGERT
MPFGQNNEHV PVRLIDFENL DNNQYVVTQQ YTYRAGQIEK RADLMLLVNG LPLVLIEAKT
PVRKATSWVD GALQVHEDYE KFVPELFVCN VFSVASEGKE FRYGAIGVPV KDWGPWNLDD
TTTNTQHHPL HSLKSAVESM LRPHIVLDIL ANFTLFATHK KKQRSKIICR YQQYEAANRI
VERVLAGAPR KGLIWHFQGS GKSLLMVFAA QKLRLHPKLK NPTVLIVVDR IDLDTQITGT
FTAADIPNLE KAESREKLQK LLGQDVRKII ITTIFKFGEA DGVLNERSNI IALVDEAHRT
QEGDLGRKMR QALPNAFLFG LTGTPINRSD RNTFYAFGAE EDTGGYMSRY GFEESIRDGA
TLPLHFEPRL VELHIDKEAI DEAYAELTGD LSDLDRDNLA RAASKMAVLV KTPERVQRIC
ADIVQHFQSK IEPNGFKGQI VTFDRECCLL YKQEIDKLLP TEVSEIVMTV NSNEPQYKAY
ARTRDEEERL LERFRDPNDP LQLIIVTSKL LTGFDAPILQ AMYLDKPMKD HTLLQAICRV
NRTYADTKTH GLIVDYLGVF DDVAKALEFD DKNILKVVSN IQELKNQLPD AMQRCLTFFI
GVDRTLQGYE GLIAAQQCLP NNTVRDNFAA EFSVLNKLWE AISPDPMLNQ YETDYRWLSQ
VYQSVQPSSG HGKLIWHSLG AKTIELIHQN VHVEALRDDL DTLILDADLL EAVLSNPDPK
KVKEIEIKIS RRLRKHMGNP KFKALSERLE ELRNRQEQGL ITSVEFLKQL LQLAKDLLQA
EKETPPEEDE DRGKAALTEL FQDVKTEETP VMVERIVADI DEIVRLVRFP GWQHTLAGER
EVKKALRKSL FKYRLHQDEE LFEKSYGYIR QYY