Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0695 |
Symbol | |
ID | 6369410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 704498 |
End bp | 705997 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642676087 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_001950941 |
Protein GI | 189423764 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000410524 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCATC TTTTGCTCTG TTCTGGGAGA GGTGACCTCC ACACCATGAG AATGCTGATG CTTGTCATAC CGCTACTGGC CGTTGCTGTC GGAACTGCAG CCGGTGGTGA ACCAACCCAG TCCCTGCTGA ATGAGCTGGT GCAGCCGCAT TCGACAGGAA ACGGCAGGTT GACAGCGGGC GGGGGAAAGG GGCTGCCTCA GGTCGCGCTT GGTGAATCGC AGGGCGATGA TGGTGCAACG CTGTTCACGC TGGAGGAACT GAAGGACGGG ACATCTGCGT TGGCAGATCT GGCATTGCCT GATGATGAGC CGGCTGCTGA TGTGCCGCTT GCCCTGAACG ACAAGGTTAA TTATTTCATT ACATTCTTTC AAACCAAGGG GCGTGCAACC TATGCACGCT GGCTTTCCCG TTCAACCCGG TATCTGCCGA TGATGAAGGA GATCCTGCGC AAGGAAGGCT TGCCGGACGA ATTGGTCTAT GTAGCCATGA TAGAGAGCGG CTTCCAGCTG AATGCGCGCT CATGGGCCAA CGCGGTTGGA CCCTGGCAGT TCATGTCGGC AACCGGCCGT CGCTACTCGC TGCGGATTGA TCAATGGGTT GATGAACGCA AGGATCCGGT CAAAGCGACC ATGGCTGCGG CCATGTACCT GAAGGATCTG TACGGCATGT TCAATAATGA CTGGTATCTG GCTGCTGCCG GATATAATGC CGGTGAAAAC AAGATTTTCC GCGCTATTGA CAAATATGAT ACCAACGACT TCTGGGAGCT TTCCAAGGGA TCCTACCTGA AGCGGGAAAC CAAGGAGTAC GTTCCCAAGC TGCTTGCTGC CGCTATTATT GCCAAGGATC CGGCCAGGTA TGGCTTTACG GAGATTGCCA CGGTACCGGT CGTCGAGTAC GATACCGTGA CAGTGAAGGG GCGTACGGAT CTTGATCTGG TTGCCCGCCT GACCGGCACT ACCTACCAGA GCATCAAAGA GCTGAACCCT GCACTGCGGC ACTGGTGTAC CCCCCCTAAT TATCCGGACT ATGAGCTGAA GGTCCCCAAA GGGACTAAAC TCCGTTTTGA ACAAGGGATA GCTGCAGTGC CGGATGACCA GCGTTTCAGC GAAAAGAACC TCTATAGCCG TTATACCGCA TCCCGCAAGG ATAACCTCAA ACAGCTTGCC CGCCGTTTCG GCAGCTCAGC CGGGGAACTT GCCGAGCTGA ACGGTTTGAG CGTGAAAGAT CGTATTGCCG GGCGTTCTTT GATCATTCCT GTAAAACAAT CCGTTAATTT TGCCCAGGAA GGGCGTCGTG AAGCATCTGC AACCGGTGCA CCCGCACTTA CCTATTACAC CGTGCGCAAG GGAGATACGC TCCATTCCCT TGCCCGGCGT TTTAATGTCT CTGTAAAAGT ACTTACTGCC TGGAATAATT TGAAACATGC CGTCGCACTT AAGCCGGGCA AACGTCTGAT AGTTGCCAGA GCAGCAAAGG CAGTAAGCAG CAAAGGGTGA
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Protein sequence | MPHLLLCSGR GDLHTMRMLM LVIPLLAVAV GTAAGGEPTQ SLLNELVQPH STGNGRLTAG GGKGLPQVAL GESQGDDGAT LFTLEELKDG TSALADLALP DDEPAADVPL ALNDKVNYFI TFFQTKGRAT YARWLSRSTR YLPMMKEILR KEGLPDELVY VAMIESGFQL NARSWANAVG PWQFMSATGR RYSLRIDQWV DERKDPVKAT MAAAMYLKDL YGMFNNDWYL AAAGYNAGEN KIFRAIDKYD TNDFWELSKG SYLKRETKEY VPKLLAAAII AKDPARYGFT EIATVPVVEY DTVTVKGRTD LDLVARLTGT TYQSIKELNP ALRHWCTPPN YPDYELKVPK GTKLRFEQGI AAVPDDQRFS EKNLYSRYTA SRKDNLKQLA RRFGSSAGEL AELNGLSVKD RIAGRSLIIP VKQSVNFAQE GRREASATGA PALTYYTVRK GDTLHSLARR FNVSVKVLTA WNNLKHAVAL KPGKRLIVAR AAKAVSSKG
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