Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0680 |
Symbol | |
ID | 6369326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 688947 |
End bp | 690902 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642676071 |
Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
Protein accession | YP_001950926 |
Protein GI | 189423749 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACGT CACACAACCT TGAGGAAAAA CTCAATCGGG CCAATCGGGC ACTGCAACTG CTTTCGGCCA GCAATAGAGC TCTGCTCCGT GCCCGTGACG AATCCTCTCT GCTGCATGAT ATCTGCCGGA TCGCGACTGA GATCGGCGGC TACTCCCTTA GCTGGATCGG CTACAAAAAG CTGGATGCCG CGCAATCCAT CCGCCCAGTT GCCTATTCAG GTCACGACGA AGGATTTCTT TCCGCAGCCA ATATGTCGTG GGCAGATTGC AATCGCGGCC GCAGTGCCAT GAGTACCGCC ATCCGTGCCG GAATAACCCA GCTCAGGCCT GATATTCTGA ATGATCCCCA ACTCTCCTAC TGGCATGAAG ATGCCGGCAG GAGAAATTAT CGTTCGGCAG TCGCACTGCC GCTGCAGGTT GACGGAGATA CAATCGGTGC GATTGCCATC TACGCCCCTG AGCCGAACGC CTTCAACGAT GAGGAGGTCA AACTGCTTGA AGAGTTGGCC AGCGACCTCT CCTTTGGTAT CGAAACCATA CGTCTGCGCA CGGCCCATGA ACATGCCAAC GCACGTATTC ACCGGTTGGC GTTTTTTGAT ACCCTGACCG GCCTGCCCAA CCGGAACCAT CTTGCTGGTC TGCTTGCCGA CTCGATCGCT GCTGCAAAGC AAAACAACAA CCAATTAGCG CTGTTTTTGC TGGATCTTGA TTATATCCGT GAGATCAATG AAACCTATGG ACATGAGACC GGTGACTGGA TACTGGTTCA GGTGGCACAG AAGCTGTGCG GATTGGTTGA TGACAGTGCG CTGGTAGCAC GTTTTGGTGG CGATGACTTT ATCATTATCT ATGAGCAGAG CACGGTGCAT AAAGTCAGAA ACCTGGCAAA GCATATCCTG GCAGCCATCA AACAGCCGTT TCTGTTTGAT GCGCGCTCCT TTTCAATCAG CGGGAGTATC GGTATCGCTT TTTATCCTGA TGATGCCGAT ACTCCGACGG ATCTGCTTTC AAGGGCTGAT CTGGCAATGT CGAAGGTGAA GGGGGCGGGT GGCGGTTACT GTCTCTACAA AAGAGACATG AGCCATCTGC TGACCAGAAA GCTGGAACTG GTTCAGCGCC TTGAGTGCGC ACTGGCAGAG GGTAACCTGC ACCTGTATTA CCAGCCGAAG GTTGAGTTGT ACGCCGGTAT GATGGTTGGG GCTGAGGCGT TGCTCCGTTG GCAGGATCCG GTGCTGGGGT GGGTGAGCCC GGCTGAGTTT ATCCCGGTGG CAGAGGGACG CGGCTTGATG CCCCAAATTG GTGAGTGGGT TCTCAAAACC GCCTGTCAGC ATATCAAGAG TTGGAAGAGT AAAGGGCTGA ACTGCCGTGG TAAAATTGCC GTTAACGTTT CTGCTCAACA GTTTGGAGAC CCCTATTTCC TTGAGCGGGT GGCACGGGTG CTTGAAGAAA CCGGTGTGTT GCCATCCAAT ATTGAACTGG AGTTGACAGA AAGTTGCCTG ATGGACGATC CGGAACGGAT GTCCGAGATC ATGAAGTCAC TACGGGGGAT GGGGTTCAGT ATTGCAATCG ATGACTTTGG TACCGGCTAT TCATCACTGG CCTATCTCAA GCGGTTTCCG ATCGATACCC TGAAAATAGA CCAGACCTTT GTCAAAAATA TGCTTGATGA CAATAATGAT AAGGCAATTA TCTCGACCAT TCTGGCGATT GCCAAACAAA TGGGGCTGAT GACGGTCGCT GAAGGGGTCG AGACGGAAGA ACAGCGTTGC GCGCTTCAAA AGCTCGGTTG TGTTCTGGCT CAGGGATATT ATTTCTGTCG GCCGGAGCCG ATGGACGACT TTACGGAAAA GAGGCTGAAA GCTGTCTGTT TGCTCCCGAA AAACAGTAAT GCAAAACAGC CTGCGATGAC TTCAGCGGGG CGTGTCAAGG AAGCTGCCGG TAGCAGTGCT GTATAA
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Protein sequence | MQTSHNLEEK LNRANRALQL LSASNRALLR ARDESSLLHD ICRIATEIGG YSLSWIGYKK LDAAQSIRPV AYSGHDEGFL SAANMSWADC NRGRSAMSTA IRAGITQLRP DILNDPQLSY WHEDAGRRNY RSAVALPLQV DGDTIGAIAI YAPEPNAFND EEVKLLEELA SDLSFGIETI RLRTAHEHAN ARIHRLAFFD TLTGLPNRNH LAGLLADSIA AAKQNNNQLA LFLLDLDYIR EINETYGHET GDWILVQVAQ KLCGLVDDSA LVARFGGDDF IIIYEQSTVH KVRNLAKHIL AAIKQPFLFD ARSFSISGSI GIAFYPDDAD TPTDLLSRAD LAMSKVKGAG GGYCLYKRDM SHLLTRKLEL VQRLECALAE GNLHLYYQPK VELYAGMMVG AEALLRWQDP VLGWVSPAEF IPVAEGRGLM PQIGEWVLKT ACQHIKSWKS KGLNCRGKIA VNVSAQQFGD PYFLERVARV LEETGVLPSN IELELTESCL MDDPERMSEI MKSLRGMGFS IAIDDFGTGY SSLAYLKRFP IDTLKIDQTF VKNMLDDNND KAIISTILAI AKQMGLMTVA EGVETEEQRC ALQKLGCVLA QGYYFCRPEP MDDFTEKRLK AVCLLPKNSN AKQPAMTSAG RVKEAAGSSA V
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