Gene Glov_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_0680 
Symbol 
ID6369326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp688947 
End bp690902 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content53% 
IMG OID642676071 
Productdiguanylate cyclase/phosphodiesterase with GAF sensor 
Protein accessionYP_001950926 
Protein GI189423749 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACGT CACACAACCT TGAGGAAAAA CTCAATCGGG CCAATCGGGC ACTGCAACTG 
CTTTCGGCCA GCAATAGAGC TCTGCTCCGT GCCCGTGACG AATCCTCTCT GCTGCATGAT
ATCTGCCGGA TCGCGACTGA GATCGGCGGC TACTCCCTTA GCTGGATCGG CTACAAAAAG
CTGGATGCCG CGCAATCCAT CCGCCCAGTT GCCTATTCAG GTCACGACGA AGGATTTCTT
TCCGCAGCCA ATATGTCGTG GGCAGATTGC AATCGCGGCC GCAGTGCCAT GAGTACCGCC
ATCCGTGCCG GAATAACCCA GCTCAGGCCT GATATTCTGA ATGATCCCCA ACTCTCCTAC
TGGCATGAAG ATGCCGGCAG GAGAAATTAT CGTTCGGCAG TCGCACTGCC GCTGCAGGTT
GACGGAGATA CAATCGGTGC GATTGCCATC TACGCCCCTG AGCCGAACGC CTTCAACGAT
GAGGAGGTCA AACTGCTTGA AGAGTTGGCC AGCGACCTCT CCTTTGGTAT CGAAACCATA
CGTCTGCGCA CGGCCCATGA ACATGCCAAC GCACGTATTC ACCGGTTGGC GTTTTTTGAT
ACCCTGACCG GCCTGCCCAA CCGGAACCAT CTTGCTGGTC TGCTTGCCGA CTCGATCGCT
GCTGCAAAGC AAAACAACAA CCAATTAGCG CTGTTTTTGC TGGATCTTGA TTATATCCGT
GAGATCAATG AAACCTATGG ACATGAGACC GGTGACTGGA TACTGGTTCA GGTGGCACAG
AAGCTGTGCG GATTGGTTGA TGACAGTGCG CTGGTAGCAC GTTTTGGTGG CGATGACTTT
ATCATTATCT ATGAGCAGAG CACGGTGCAT AAAGTCAGAA ACCTGGCAAA GCATATCCTG
GCAGCCATCA AACAGCCGTT TCTGTTTGAT GCGCGCTCCT TTTCAATCAG CGGGAGTATC
GGTATCGCTT TTTATCCTGA TGATGCCGAT ACTCCGACGG ATCTGCTTTC AAGGGCTGAT
CTGGCAATGT CGAAGGTGAA GGGGGCGGGT GGCGGTTACT GTCTCTACAA AAGAGACATG
AGCCATCTGC TGACCAGAAA GCTGGAACTG GTTCAGCGCC TTGAGTGCGC ACTGGCAGAG
GGTAACCTGC ACCTGTATTA CCAGCCGAAG GTTGAGTTGT ACGCCGGTAT GATGGTTGGG
GCTGAGGCGT TGCTCCGTTG GCAGGATCCG GTGCTGGGGT GGGTGAGCCC GGCTGAGTTT
ATCCCGGTGG CAGAGGGACG CGGCTTGATG CCCCAAATTG GTGAGTGGGT TCTCAAAACC
GCCTGTCAGC ATATCAAGAG TTGGAAGAGT AAAGGGCTGA ACTGCCGTGG TAAAATTGCC
GTTAACGTTT CTGCTCAACA GTTTGGAGAC CCCTATTTCC TTGAGCGGGT GGCACGGGTG
CTTGAAGAAA CCGGTGTGTT GCCATCCAAT ATTGAACTGG AGTTGACAGA AAGTTGCCTG
ATGGACGATC CGGAACGGAT GTCCGAGATC ATGAAGTCAC TACGGGGGAT GGGGTTCAGT
ATTGCAATCG ATGACTTTGG TACCGGCTAT TCATCACTGG CCTATCTCAA GCGGTTTCCG
ATCGATACCC TGAAAATAGA CCAGACCTTT GTCAAAAATA TGCTTGATGA CAATAATGAT
AAGGCAATTA TCTCGACCAT TCTGGCGATT GCCAAACAAA TGGGGCTGAT GACGGTCGCT
GAAGGGGTCG AGACGGAAGA ACAGCGTTGC GCGCTTCAAA AGCTCGGTTG TGTTCTGGCT
CAGGGATATT ATTTCTGTCG GCCGGAGCCG ATGGACGACT TTACGGAAAA GAGGCTGAAA
GCTGTCTGTT TGCTCCCGAA AAACAGTAAT GCAAAACAGC CTGCGATGAC TTCAGCGGGG
CGTGTCAAGG AAGCTGCCGG TAGCAGTGCT GTATAA
 
Protein sequence
MQTSHNLEEK LNRANRALQL LSASNRALLR ARDESSLLHD ICRIATEIGG YSLSWIGYKK 
LDAAQSIRPV AYSGHDEGFL SAANMSWADC NRGRSAMSTA IRAGITQLRP DILNDPQLSY
WHEDAGRRNY RSAVALPLQV DGDTIGAIAI YAPEPNAFND EEVKLLEELA SDLSFGIETI
RLRTAHEHAN ARIHRLAFFD TLTGLPNRNH LAGLLADSIA AAKQNNNQLA LFLLDLDYIR
EINETYGHET GDWILVQVAQ KLCGLVDDSA LVARFGGDDF IIIYEQSTVH KVRNLAKHIL
AAIKQPFLFD ARSFSISGSI GIAFYPDDAD TPTDLLSRAD LAMSKVKGAG GGYCLYKRDM
SHLLTRKLEL VQRLECALAE GNLHLYYQPK VELYAGMMVG AEALLRWQDP VLGWVSPAEF
IPVAEGRGLM PQIGEWVLKT ACQHIKSWKS KGLNCRGKIA VNVSAQQFGD PYFLERVARV
LEETGVLPSN IELELTESCL MDDPERMSEI MKSLRGMGFS IAIDDFGTGY SSLAYLKRFP
IDTLKIDQTF VKNMLDDNND KAIISTILAI AKQMGLMTVA EGVETEEQRC ALQKLGCVLA
QGYYFCRPEP MDDFTEKRLK AVCLLPKNSN AKQPAMTSAG RVKEAAGSSA V