| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0662 |
|---|
| Symbol | |
|---|
| ID | 6368913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 668494 |
|---|
| End bp | 670131 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642676053 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_001950908 |
|---|
| Protein GI | 189423731 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0764321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGC AGATTCAGCA AATACTGCGG CGCAGGCGTG GAGCAGAGAC AGGGGCGATT
CCGGCAGGGT GTGGTGGCGC GCTCTCGGTC TGTCTGGTCT ATCCCAATCA CTATGCCGTG
GCCATGAGCA GCCTGGGATT CCAAACGGTC TACAAGCTGT TCAATGATCA GCCGGATCTG
GTCTGTGAAC GTGCTTTTCT GCCGGACCGG GATGAACTGG ATGCCTACCT GAAATCAGGG
GATACGCTGG TGTCGCTGGA GAACGAACGA CCGTTGTCCG ACTTTGATCT GGTCGCTTTT
TCAATCTCGT TTGAGCCTGA TTTTGTAAAC ATTCCGCGCA TCCTTAAACT GGCACGCATC
CCTTCCTGTG CCGCTGACCG CACTGGTGCT GACCCGCTGG TGATTGCCGG AGGTGCCGCT
TTTCTGATCA ATCCTGAACC TGCAGCCGAG TTTTTTGACC TGATTGCCTT TGGCGAGGGT
GAGGCTCTGA TTCCTCCCCT GGCTGCGCTG TGTGTGCAGC ATGTCGCTGC AAGCCGAGAG
ATGTTGCTGC AAGAGCTTGG CAGACTGGCG GGCAGTTATC TCCCTGCAGC CGGGCATGAT
ACAGCGGTCC AAAGGATTAC GGCCCCTGCA GCAGCGCCAC CGGCCTGCTC AGTGCTGCTG
ACCGACGAAA CCGAGTTCGG CAACATGTTT TTGGTGGAGG TCAGTCGGGG CTGCCCGCGC
GGTTGCCGAT TCTGTGCTGC AGGCTTTGTG TATCAGCCAT TTCGCCAACA ACCGCTGGAG
TTGCTCAAGG CAGCAGTACT TGAAGGGCTT CAGCATCGTA AGACCATCGG TCTGGTCGGT
GCGGCCGTCT CTGATCACCG CAGTATTGAG GCGCTTTGCA ATTTTATTGT TGAACAGGAC
GGTTCTCCGT CCTTATCCTC GCTGCGGGTG GACCGATTAA CGCCTCATAT GCTTGAACTG
CTGGCCAAAT CAGGCCACCG CACAATCTCG CTGGCGCCGG AAGGCGGGTC GCAGCGGATG
CGCGATTTAA TTCGCAAGAA CCTGACTGCC GACCAGATCC TGGATGCTGC AGAGGCGGTA
GCCCGGGCCG GTATTCTGAA CCTGCGGCTG TATTTTATTA TCGGTCTGCC GGGTGAGAAT
GATCAGGATC TGGAAGAGCT GGTCAAGCTG ACGGCGGCCA TCAAAGAGAG GGTGGTTGAA
CAGGCCCGGC GGCATAAACG TCTGGGAGAA ATCACCCTGT CGGTTAACCC GTTTATTCCG
AAGCCGTTTA CGCCCCTGCA GTGGGCCGGC ATGTGCCCGC TGGAGGAGTT GAAACGCAAG
GTAGCCTGGC TTGAAAAGCG GATCAGGCCG CTTGCCAATC TGCGCCTGAA GGTGGAAGAT
CTGCATGGCT GTGTGCTGCA AGCGCTGTTG TCGCGGGGCG GCCGTGAACT GACTCCCCTG
CTGCTGCAGA TGGCGGAAGG GTTGAACCTC AGAAAGGCTG CGAAACTCTG CGGGATTGAT
GTGGAGGCCT GCGTTACCAG AATCTATGCG CCGGATGAAA AACTGGTCTG GGAAGTCGCA
CCTGTTGCGG ACAGGGAGCG GCTGCTGACC GAGTATCAGG CTGCAATGAA GCAGCTGCCG
GAGGAACAAA CACCATGA
|
|---|
| Protein sequence | MNWQIQQILR RRRGAETGAI PAGCGGALSV CLVYPNHYAV AMSSLGFQTV YKLFNDQPDL
VCERAFLPDR DELDAYLKSG DTLVSLENER PLSDFDLVAF SISFEPDFVN IPRILKLARI
PSCAADRTGA DPLVIAGGAA FLINPEPAAE FFDLIAFGEG EALIPPLAAL CVQHVAASRE
MLLQELGRLA GSYLPAAGHD TAVQRITAPA AAPPACSVLL TDETEFGNMF LVEVSRGCPR
GCRFCAAGFV YQPFRQQPLE LLKAAVLEGL QHRKTIGLVG AAVSDHRSIE ALCNFIVEQD
GSPSLSSLRV DRLTPHMLEL LAKSGHRTIS LAPEGGSQRM RDLIRKNLTA DQILDAAEAV
ARAGILNLRL YFIIGLPGEN DQDLEELVKL TAAIKERVVE QARRHKRLGE ITLSVNPFIP
KPFTPLQWAG MCPLEELKRK VAWLEKRIRP LANLRLKVED LHGCVLQALL SRGGRELTPL
LLQMAEGLNL RKAAKLCGID VEACVTRIYA PDEKLVWEVA PVADRERLLT EYQAAMKQLP
EEQTP
|
|---|
| |