| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0558 |
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| Symbol | |
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| ID | 6367703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 527083 |
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| End bp | 529764 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642675951 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001950806 |
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| Protein GI | 189423629 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.843554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT ACCGTACCAT CTGGATGGCG TTACTGCAGT GGGGGCTGCT CTGGAGCCTG
ATTGTCGGTT GCTCGTTGCT CTGGAATGAA CGCCTGATCC GGCAACAGGT CTATGAGTAC
TCCCGCCATG AAGCAACCAC CATTATCAAT AAAGATCTTG CCTTCCGGCG TTGGGCCACC
ATGCATGGAG GCGTCTATGT GCATCCCACC GAACAGACCC CGCCCAATCC CTGGTTAACC
ATACCCAAAC GCGATGTTGT GACGACTGAC GGCGACAAAC TGACCCTGAT GAATCCGGCC
TACATGACCC GTCAGGTCAT GGGGCTGTTT GGCGAGCAGT TCGGCGTCAA GGGCCATATC
ACCAGCCTGA TAGTCAAAAA TCCTGCCAAT GCGCCGGATG CCTGGGAAAG GGATGCCCTG
TTGCGTTTTG AAAAAGGGGC GACTTCTGTC AGCGAGTTGA CCATCATCAA CGGTGCTCCC
TACTATCGCC TGATTCTGCC GATGAAGATG GAGCAGGGCT GTCTGAAGTG CCACGCCGAT
ACCAGGATCC CTGTGGGCGG TATCAGGGGA GGCATCAGTG CTGCCGTGCC GCTGGCGCCG
CATCTGCAGG CCGGCGAGAG CGGGTTGAGG GGGGTTCGTC TGGCCCACGG CGGTATCTGG
CTGGCGGGGA TGATCGGCAT CACGATTGCC AGCGCCATTT ATCTGCGCCA ACAACGTCTC
AGTCAGCAGG CGGAAGACGA CTTGCGGGCC CAGGAGGCCT TGTATGCATC ATTGACCACC
GCCTCTCCCA CCGGTGTTTT CCAGGCCGAT CTGCACGGGG CCTACTGTTA CGTCAATGAT
CGCTGGTCAG CCATTGCCGG ATTGCCGTTT GAGCAGGCCC TGGGAGAGGG GTGGTTGCAG
GCACTGCATC CCGAAGACCG GGTACGGGTC TCTGAGGAAT GGCAGCACTC AGTTGCCGGA
GATTGTCCCT TCAGTCTGGA ATTCCGTTTT GTGCGGCCCG ATGGTACGGT TGCCTGGGTC
TATGGCCAGT CGGCCGAGAT CTTTGACAGC AAGGGCGGGA TTGTCGGCTA TGTCGGTACC
ATTACCGATA TCTCGATCCG CAAAAAGGCG GAGGCTACCC TGGCGGAGCA GGCCCTCTTC
CTGCGGGAGA GCCAGTCCAT TGCCCACCTG GCGGGCTGGA AGTCGAACCC GGATTCGGAC
CTGCTTTCCT GGACCGATGA GATGTACCAT ATGCTGGACC ATCCGCAGGA TGAGCCGATC
AGCCATGTTG CCTGCTTCAG GTATTTTGAT CCGCAGGATC TGCCGATGGT GGAAAAGGCG
CTGCAGGAGG CGATGCGCAA CGGTACCCCC TTCAAGTTGA GCTGCCGGAT GGTCAGCGCC
CGTGGCCGCC GTTTCTGGGC CGATTTCCGC TGCATCGGCA GGATGGATGG ACCGGATGGT
GGGTATATTG GCGGTACCCT GCAGGATATC AGCGAACACA AACAGATTGA AGAGCTGTTG
ATCAGCGCCA AGGAGATGGC CGAGGCCACC AGTCGCGCCA AGACAGAGCT GCTGGCTACC
CTGAGCCATG AGCTGCGTAC GCCGCTGAAT GGTGTGATGG GAGGGGTGCA GTTGCTTGAG
ATGACGGATC TTTCGGCAGA TCAGGAAGAA TACCTGCAGA TGGTCAGGAC ATCGGCAACC
AATGAGCTGG CTCTGGTGAA CGACCTGCTT GATCTGGCCG GGCTTGAGGC ATCAGGCCTG
AAGGTCGAGT CAACGCCGTT CAATCTGCTG GAGAGCATTA AACTGGCCAT CACACTGCAC
CGCAGCGCAC TGGAGACGCG GGGGTTGCCA CTTGTGACCA GTCTGCCGGA GAGTCTGGCA
CAGCTGGTGA TTGGCGACGG GCGCCGCCTG ACCCAGATTG TCTCCAACCT GCTGGGCAAC
GCGATCAAGT TTACCGAGCA GGGGGGGATC TCCCTTGCCG CGGATTGTAC GCCGTGCGGC
GGCAGTGAGC TGCGGCTGCA GGTGCGGGTC AGCGATACCG GCATCGGTAT TGCTGAAAAA
GATCTGCAAC GGATCTTTGA GCCCTTTGTG CAGGCCGATA TGTCCAGCAC CCGCAGGTTT
GGCGGCACCG GCCTCGGCCT GGCGATCTGC CACCGGCTGG CAGAGCGGAT GGGGGGCAGC
ATCCGTGTTG ACAGTATCCC CGGTGAGGGG AGCAGTTTTA CCCTTGAGCT GCCGTTTCTG
GCCGCCGCCG CTGATCTGGC CGAGACGGAC GGGCATGACG CAGCCCTGCA GCCGCTCTGG
CATGGCTCAC GCCTGACGGT AGTGATTGCT GAAGACAATC CGGTCAACCT GAAGGCAGCC
GCAGGGCTGG CGGGCAAACT GGGGCTCAGG GTACTCTGCG CTGAAGACGG CAAGCAGGCT
CTGGCGCACT GGATGTCAGG CGGAGTTGAT GTTATCCTGA TGGATATCCA GATGCCGGTC
ATGGACGGCA GTGAGGCCAC CCGTTTTATC CGTCAACGTG AGCAGGGCAG CGGTGCGCAC
ACGCCGATCA TCGCCCTGAC CGCCCATGCT ATGGCCGGCG ACCGTGAACG ACTGCTGGCC
GAGGGATTTG ACGGCTACGT GGCCAAGCCG TTTCTGATCA ACGAGCTGGC AGCGGAACTG
GAACGCGTAA CTACGGCTGT GGCCGCTGTC TCTTCTGTTT GA
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| Protein sequence | MKKYRTIWMA LLQWGLLWSL IVGCSLLWNE RLIRQQVYEY SRHEATTIIN KDLAFRRWAT
MHGGVYVHPT EQTPPNPWLT IPKRDVVTTD GDKLTLMNPA YMTRQVMGLF GEQFGVKGHI
TSLIVKNPAN APDAWERDAL LRFEKGATSV SELTIINGAP YYRLILPMKM EQGCLKCHAD
TRIPVGGIRG GISAAVPLAP HLQAGESGLR GVRLAHGGIW LAGMIGITIA SAIYLRQQRL
SQQAEDDLRA QEALYASLTT ASPTGVFQAD LHGAYCYVND RWSAIAGLPF EQALGEGWLQ
ALHPEDRVRV SEEWQHSVAG DCPFSLEFRF VRPDGTVAWV YGQSAEIFDS KGGIVGYVGT
ITDISIRKKA EATLAEQALF LRESQSIAHL AGWKSNPDSD LLSWTDEMYH MLDHPQDEPI
SHVACFRYFD PQDLPMVEKA LQEAMRNGTP FKLSCRMVSA RGRRFWADFR CIGRMDGPDG
GYIGGTLQDI SEHKQIEELL ISAKEMAEAT SRAKTELLAT LSHELRTPLN GVMGGVQLLE
MTDLSADQEE YLQMVRTSAT NELALVNDLL DLAGLEASGL KVESTPFNLL ESIKLAITLH
RSALETRGLP LVTSLPESLA QLVIGDGRRL TQIVSNLLGN AIKFTEQGGI SLAADCTPCG
GSELRLQVRV SDTGIGIAEK DLQRIFEPFV QADMSSTRRF GGTGLGLAIC HRLAERMGGS
IRVDSIPGEG SSFTLELPFL AAAADLAETD GHDAALQPLW HGSRLTVVIA EDNPVNLKAA
AGLAGKLGLR VLCAEDGKQA LAHWMSGGVD VILMDIQMPV MDGSEATRFI RQREQGSGAH
TPIIALTAHA MAGDRERLLA EGFDGYVAKP FLINELAAEL ERVTTAVAAV SSV
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