Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0460 |
Symbol | |
ID | 6366675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 431605 |
End bp | 432291 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642675852 |
Product | alanine racemase domain protein |
Protein accession | YP_001950708 |
Protein GI | 189423531 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTCA CCGGTAATCT TGCTGCAGTG CAGGCCCGCA TACAACGAGC CTGCACGATC TCGGGCAGAG CCCCTTCCAC GGTGCGGCTG GTGGCGGTCT CCAAGCTGCA TCCGGCAGCG CTGGTTGCCG AGGCTGCCGC TGCCGGGCAG ACTGTTTTTG GAGAAAACTA TGTCCAGGAG CTGGTCGACA AGGCAGCTCA ACTGGCCCGT CCCGTTGAGT GGCATATGAT CGGCCACCTG CAGAGCAACA AGGTCAAGTA CCTGCCCGGC ATTGTCAGCA TGATCCATAC GGTTGACCGC CTGTCACTGG CCCAGGAGAT TGACCGGCAG TGGCGCGACA AACAGTCTGC AGCTTGTGAT ATTCTGGTGC AGGTCAATGT CTCGGGGGAG GCCACGAAGT CAGGCACAAC CGCAACTGAG GCTGTTGAGC TGGTCAGACA CATTGCCAAA TTGCCTAACG TCAGGGTGCG CGGGCTGATG ACCATGCCGC CTTTTTTTGA TGATCCTGAG GCAGCCCGGC CCTATTTCAG AGAGCTGCGG TTGCTGGCAG ACCGGATCAG CAGTGAGCAG ATTCCCGCTG TCGAGATGAC TGAGCTTTCT ATGGGGATGT CCGGCGATTT TGAAGTGGCG ATTGAGGAAG GTGCCACCCT GGTACGGGTC GGCACGGCTA TTTTTGGTGG ACGCTAG
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Protein sequence | MSVTGNLAAV QARIQRACTI SGRAPSTVRL VAVSKLHPAA LVAEAAAAGQ TVFGENYVQE LVDKAAQLAR PVEWHMIGHL QSNKVKYLPG IVSMIHTVDR LSLAQEIDRQ WRDKQSAACD ILVQVNVSGE ATKSGTTATE AVELVRHIAK LPNVRVRGLM TMPPFFDDPE AARPYFRELR LLADRISSEQ IPAVEMTELS MGMSGDFEVA IEEGATLVRV GTAIFGGR
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