| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0380 |
|---|
| Symbol | |
|---|
| ID | 6366061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 353768 |
|---|
| End bp | 354652 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642675772 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001950628 |
|---|
| Protein GI | 189423451 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.270994 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCT TTATCGCCGG CGGCACCGGA TTTGTGGGCG GGCACCTGAC CGCAGAGCTG
CTGAAGCGTG GTCACGAACT GGTGCTTCTG AGCCATGCCC GTAGCGGTTC AACAGCGGCA
GGAGTCACCT TTGTCAAAGG CGATGTCGTT GACCCGGCCG TTTATGGTGC TGCCATGAAA
GGCTGCGACG CGGCGATCAA TCTGGTGGGG ATCATTCGCG AATTTCCCGC CAAAGGGGTC
ACCTTTGAAC GGCTGCATGT GGAGGCCACC GCCGGCATGG TTCAGGCGAC ACAACATGCG
GGTGTGCTGC GCTACCTGCA GATGTCCGCC CTTGGCACCA GGCTTGATGC GGTTTCCGGC
TACCATCGCA CCAAATGGCG GGGAGAGGAG ATCGTACGGG GCAGCGGGCT GGCCTGGACC
ATCTTCCGGC CTTCACTGAT CTTTGGCCCC AGGGATGCCT TTGTCAACAT GCTGGCAGAC
AACCTGCGGC TGGCACCGGT CATGCCCACC ATGGGGGACG GCACGTACCG GCTGCAGCCG
ATCCACGGCA GCGATGTAGC CCGCTGTTAT GCCGACGCGT TGGAAAAGCC GGAGACCGCT
GGCCAGACCT TTGAGCTGTG TGGCGAGGAT CGCCTGACCT ATCGTGAACT GCTGGATGCC
ATTGCCGAGG CGATGGGCAA GGGCCACCCC TGGAAACCGT CCCTGCCGTT ATCGTTGATG
AAGCCGGTGA TCAAGGCGCT GCAGGGGTTC AAGGCCTTTC CGATTACCAT GGACCAGCTG
CAGATGCTGC TTGAGGAAAA TATCTGCGAC GGCTGCTGGA GGAAAGCCTT TGAATTTGAA
CCGATCCGCT TTAGAGACGG TATCCGGGAG TACCTGCAAC GATGA
|
|---|
| Protein sequence | MKIFIAGGTG FVGGHLTAEL LKRGHELVLL SHARSGSTAA GVTFVKGDVV DPAVYGAAMK
GCDAAINLVG IIREFPAKGV TFERLHVEAT AGMVQATQHA GVLRYLQMSA LGTRLDAVSG
YHRTKWRGEE IVRGSGLAWT IFRPSLIFGP RDAFVNMLAD NLRLAPVMPT MGDGTYRLQP
IHGSDVARCY ADALEKPETA GQTFELCGED RLTYRELLDA IAEAMGKGHP WKPSLPLSLM
KPVIKALQGF KAFPITMDQL QMLLEENICD GCWRKAFEFE PIRFRDGIRE YLQR
|
|---|
| |