| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0316 |
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| Symbol | |
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| ID | 6368846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 291453 |
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| End bp | 293900 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642675707 |
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| Product | sex pilus assembly protein |
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| Protein accession | YP_001950564 |
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| Protein GI | 189423387 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR02746] type-IV secretion system protein TraC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGTAG CGTCAGCGTT GTTTGGAAGT GGAGGAGGCT TCACCAGGAG CGAATTGCGC
CGCCTCACCG AACGGGACAA TTTTTCCGAA TATTTCCCGT GGATTGCCCA TGACCCCAAG
AATCAGATCT ATCTGAACAC TGACAACACC TTCGGGATGA TGTGGGAGTG TGCTCCCCTG
GCTTTTGCCT GTGAGACTAC CATCAGGACT CTGGAGGGGT TGTTCCGTGT AAACCTGCCT
GATGGCTCGA TCATGCAATT CATCCTGTTT GCCGACCCCT TTGTGAATCA GATTGTGGAC
ACTTACACTT CCATGAAATT GCGCGACAGC AAACTGGTAC GCGATGTTTC TGACAACGTG
TCCCGATTCT TTCAGGAAGG TGTGGAAGGC CTCGGCTGTC TGAGCGGTAT TCCGATCCGA
AACTTCAGGA TGTTTTTTAC GGTCAAGTTT CCGGTGAAGG ATAGTGCTCA TGTAAATCTT
GATGAAGTGT TCGGAACAAT CCAGGAAGTG CTGCGTGGCG CCGGCTTATC ACCGGTTGTT
GTCAATCCGG GGAACTTGCT GGATTGGCTG AGACGCATGC TGAATGAGGA CCCGTCTGCA
AATAGCAGTC ACTATGATGA TCGCAATATC ATCCGCAAGC AGGTGCTGCT CGGGACCAAG
GTAGAGAAAA GGTTCTCTTC TCTCAAGTTC GGTTCCCGAC ACTTCCGCTG CGTCACCCCG
AAGTCATTCC CTCTGAATGG CGACCCGATC CAGACCAACC AACTCTTTGG TGGAATCATG
GGGATGGCTA CCGATTCCGA TCAGATCCGG ACGCCATTCT TCTTTACGCT GAATATCGTC
CTGCGGAACC AGAAGAATAA ACTCCACACC AAATGCAACA TGGTCCTGCA GCAGCAGGGT
GTCGGCAGTT TCGCCCCATC GCTGGCCAGA AAGAAAGACG AGTACCTCTG GGCGGTCGAT
GAACTGGAAC GGGGCACCAA ATTCTACCGG GTAATTCCTA TCATGTGGGT CTACGGCAGC
GACGAATGGC TGGTAAATGA GTCCGTCACC AGGGCCAAGC GGGTCTGGGA GGGCCAAGGG
TATGTCATGC AGGAGGATAA GGGGATTCTT CCCATCCTGT TCATCTCTTC CCTGCCATTT
GGTCTCTACG ACCACGGCAG CAACATCGAC ACTCTTGACC GGGACCATAT TCTCCCCGTC
GACAGTATCG CCGTGATGTT ACCGGTGCAG GGGGACTTCT CCGGACTGGG CAAACCGGTA
ATGCTCTTCG CCGGACGCAA GGGAAATCTA TTCGGTCTCG ACATCTTCAA CAAGGGAGTC
AACAACCACA ACGCCATGGT CTGCGCCTCC AGCGGCGCCG GCAAAAGCTT CTTTATCAAC
TATCTGGTCT ACAACTACTT CGCCATGAAA TCGAAGATCC GGATCATCGA CATCGGCGGG
TCCTACAAGA AGATGACCAA ACTGTTCGGT GCCCGCTACC TGGACTTCAG CGAAGACTCC
CAGGTGTGCC TGAACCCCTT CACCAACATC ATCGATCCCG AGTACGACAT CCCGGTTATC
GCTCCCATCG TTGCCCAGAT GGTCTTTTCT ACCGGAAAAA CCATCCCCAG CGAGACAGAG
ATGACCCTCA TCAAAGGAGC GGTTCGCTGG GCCTGGCAGC AGAAGGGCAA CGATGCAGAT
ATCGATACCG TCCACGAGTA CCTGTTCAAT TTCGACCGCT ACTCGTCAGA GGGTGGCGAG
ATCAAGGAGG CTGCTTCCCG GCTTGCCTTC AACCTGGCCG ACTTCAAGAG CGACGGAACA
TTTGGCCGTT TCTTCAACGG CAAAAGCAAT CTCGACATCT CCAATGATGA GTTCGTGGTG
TTGGAACTGG AGCACCTCAA GTCCCGTAAG GAATTGTTCC GGGTAGTCAC CCTTCAGGTG
ATAAATGCCG TAACCCAGGA TCTCTATCTC TCAGACAAGT CTGATCAGCG ACTGATCGTT
TTTGATGAGG CATGGCAATT CCTTGGAGAG AGTTCGACCC TGAAGGAGGT CATTGAGGAA
GGGTACCGTC GTGCCCGCAA ATACCATGGC AGTTTCACCA TAATCACCCA GTCGGTACTC
GACATGAAGC TCTTCGGCGG AGTTGGCGAT GTCATCCGGA ATAACTCGGC CTTCAAATTC
TATCTGGAGT CGTCCGACTT CGAGAAGGCG CTGGACGAGA AGCTGATGGA CTACGACGAT
TTTACCATGC GGATTCTCAA GTCAACGAAG AGCAACAAGC CCAAGTACTC GGAGATCTTC
ATGGACACTC CTTTCGGCGT CGGAGTCGGC AGATTGGCCG TAGATCCTTT CTCCTACTAC
GTCTTCACGT CTGATGCGAG CGAGATAACT GAAATAGAGG CAATGGTTGA TGGCGGAGTG
AGTTATGAGG ATGCAATCCG TGAGATGGTC AAGAAATACC GCAGTTAG
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| Protein sequence | MGVASALFGS GGGFTRSELR RLTERDNFSE YFPWIAHDPK NQIYLNTDNT FGMMWECAPL
AFACETTIRT LEGLFRVNLP DGSIMQFILF ADPFVNQIVD TYTSMKLRDS KLVRDVSDNV
SRFFQEGVEG LGCLSGIPIR NFRMFFTVKF PVKDSAHVNL DEVFGTIQEV LRGAGLSPVV
VNPGNLLDWL RRMLNEDPSA NSSHYDDRNI IRKQVLLGTK VEKRFSSLKF GSRHFRCVTP
KSFPLNGDPI QTNQLFGGIM GMATDSDQIR TPFFFTLNIV LRNQKNKLHT KCNMVLQQQG
VGSFAPSLAR KKDEYLWAVD ELERGTKFYR VIPIMWVYGS DEWLVNESVT RAKRVWEGQG
YVMQEDKGIL PILFISSLPF GLYDHGSNID TLDRDHILPV DSIAVMLPVQ GDFSGLGKPV
MLFAGRKGNL FGLDIFNKGV NNHNAMVCAS SGAGKSFFIN YLVYNYFAMK SKIRIIDIGG
SYKKMTKLFG ARYLDFSEDS QVCLNPFTNI IDPEYDIPVI APIVAQMVFS TGKTIPSETE
MTLIKGAVRW AWQQKGNDAD IDTVHEYLFN FDRYSSEGGE IKEAASRLAF NLADFKSDGT
FGRFFNGKSN LDISNDEFVV LELEHLKSRK ELFRVVTLQV INAVTQDLYL SDKSDQRLIV
FDEAWQFLGE SSTLKEVIEE GYRRARKYHG SFTIITQSVL DMKLFGGVGD VIRNNSAFKF
YLESSDFEKA LDEKLMDYDD FTMRILKSTK SNKPKYSEIF MDTPFGVGVG RLAVDPFSYY
VFTSDASEIT EIEAMVDGGV SYEDAIREMV KKYRS
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