Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0153 |
Symbol | |
ID | 6367250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 144073 |
End bp | 145332 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642675552 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001950409 |
Protein GI | 189423232 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAACT CTCTTGAAAA CAGCACCGAG CCAAGCTGCC CGCAACCTTC CGAAAACCAG CTGACAGCTG CACTGGTAGT ATTTTTAGCC GCTGGAGGCG GCCTGGCAGT GGCCACCCTG TATTACAGCC AACCGATGCT GGGGATACTG GGGGTTGCTA TCGGCGCCTC TGATCATGCA GTGGGTTTGA TACCAACCTT AACGCAACTG GGGTATGCCA TGGGGATTCT GCTGCTCGCC CCGCTTGGAG ACCGCTACGA CCGGCGGCGG ATTATCCTTG TCAAGGCAGC AGTACTGGCA CTTGCACTAG TGGCTGCAGC AGTAGCACCT TCGATCCTAT GCCTGTTGGC AGCCAGCCTG GTGATCGTCC TTTCCGCCAC CATGGCACAG GACATCGTAC CTTCAGCAGC TCACCTGGCC TCTGACTCCC AACGGGGCAG GGTTGTCGGC ACCGTGATGA CCGGGTTGTT GCTTGGCATT GTACTGTCCC GCGTGGTCAG TGGTTACGTG GCAGAGCACT TTGGCTGGCG CACGGTCTTC TGGGGTGCTA GCGCCAGCAT TGTGCTGACT GGCGTGGTGG CATGGCGTCG CCTGCCGCGC TTCAAGCCGA CCATGCAGGT ACCATACGCT GAGTTGATGC GATCGCTGGT TCAGTTGTGG AAACGCCATG GCGAGCTGCG TCGAGCAACC TTGGCGCAAG GCCTGCTGGC AGTCGGATTC AGCGCCTTCT GGTCAACGCT GGCCATAATG CTGCATGCTG CGCCATTCCA TCTCGGCAGT CAGGCTGCTG GCGCCTTTGG CCTGGCTGGA GCGGCTGGCG CCTTGGCAGC CCCCGTTGCC GGGCGTGTTG CCGATCGGCA AGGGCCTGAA CAGGTGACCA AACTGTGTGC AGCACTTGTT GCCCTGTCAT TTGCTGCCAT GTTTTTTCTG CCGTTTTTGT CTCCCCACGC TCAACTATGG CTGCTTGGGG CCAGTGCGAT CGGTTTTGAT CTGGGCGTGC AGGGCACCCT GATTGCCCAT CAGACCATTA TTTACAGCAT TGATCCCGGT GCACGGAGCC GCCTCAATGC GATCATGTTC GTCGGTCTGT TTATAGGCAT GGCCGCTGGT TCGGCGCTGG GCAGCCTGAT GCAGGCTGCA TGGGGATGGA TGGCGGTAAC GGCACTGGCA ACAATTGCGG CGCTGGGAGC ATTGGCAACG CGCTTGTGGC CTGCCGGCAG GGTTGCCAAC AGGTCCGCCC TTGCCACTGA AGAAGCATAA
|
Protein sequence | MSNSLENSTE PSCPQPSENQ LTAALVVFLA AGGGLAVATL YYSQPMLGIL GVAIGASDHA VGLIPTLTQL GYAMGILLLA PLGDRYDRRR IILVKAAVLA LALVAAAVAP SILCLLAASL VIVLSATMAQ DIVPSAAHLA SDSQRGRVVG TVMTGLLLGI VLSRVVSGYV AEHFGWRTVF WGASASIVLT GVVAWRRLPR FKPTMQVPYA ELMRSLVQLW KRHGELRRAT LAQGLLAVGF SAFWSTLAIM LHAAPFHLGS QAAGAFGLAG AAGALAAPVA GRVADRQGPE QVTKLCAALV ALSFAAMFFL PFLSPHAQLW LLGASAIGFD LGVQGTLIAH QTIIYSIDPG ARSRLNAIMF VGLFIGMAAG SALGSLMQAA WGWMAVTALA TIAALGALAT RLWPAGRVAN RSALATEEA
|
| |