| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0147 |
|---|
| Symbol | |
|---|
| ID | 6366215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 137480 |
|---|
| End bp | 139159 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642675546 |
|---|
| Product | nickel-dependent hydrogenase large subunit |
|---|
| Protein accession | YP_001950403 |
|---|
| Protein GI | 189423226 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGAA TCACGATTGA CCCGATTACC CGCATTGAAG GACACCTGCG GATCGATGTT
GAAGTAACCG GCGGACAGGT CAGTAAGGCC TGGTCATCCG CCCAGATGTG GCGCGGTATT
GAGACCATTC TCAAGGATCG TCCCCCCCAG GATGCCTGGA TCTATGCCCA GCGCTTCTGC
GGGGTCTGCA CCACGGTGCA TGCCATCTCC TCGATCCGCT CCGTGGAGCA TGCCCTCAAG
GTTGAGGTGC CGCTGAACGC CCAGTACATC CGCAACATCA TCATGGCCCA GCATTCCGTG
CAGGACCACA TCGTCCACTT CTATCACCTC TCGGCCCTGG ACTGGGTGGA TATCGTCTCG
GCCCTCAAGG CCGACCCCAA GAAGGCCGCC TCGATTGCCC AGTCGGTCTC GGACTGGCCC
GGCAACAGCG AGAAGGAGTT CAGTGATGTC CAGAAACGGC TGAAGGCCTT TGTGGATTCC
GGCAAGCTGG GGATCTTTGC CTCCGGCTAC TGGGGCCACC CGGCCATGAT CCTGCCGCCG
GAGATCAACC TGATTGCCAC CGCCCACTAC CTGAAGGCGC TGGATTATCA GCAGAAGGCT
GCCCAGGCCG TGGCCATTCT GGGGGGCAAG AACCCGCACA TCCAGAACCT CTGCGTGGGT
GGTGTGGCAA CTGCCCTGAA CATGGACAAC CTGGCCACCA TCAACATGGA GCGGATCGCC
TACCTGAAGG CGCTGATGAC CGAGACCCGC GAGTTTGTCA AAAAGGTCTA CTACCCGGAT
CTGCTGGTGA TCGGCAAGGC CTATAAGGAC TGGTTCAAGC ATGGCAAAGG GGTGGTCAAC
TACCTGGCGG TGCCGGAGTT TGCCGAAGAT ACCAAGAACA CCAGCTTTGC CCTGCCGGGC
GGCCTGATTA TGGGCGGCGA CGTGGCCAAG GCCCGCATCA TCAGCACCCA CCAGGACCAG
CAGCTGATCG GCAGCATCAA GGAATCAGTG GCCTGCGCCT GGTATGAAGG CAAGTCCTCC
CTGCACCCCT GGGAAGGTGA GACCAAGCCG GACTACACCG ACTTCCAGGA AAACGGCAAG
TATTCCTGGT GCAAGGCGCC CCGGATTGAC GGCAAGCCGA TCCAGGTCGG GCCGGTGGCC
CAGCTGCTGG CAGGCTACGC TGCCGGTAAC CAGCGGGTAC GCAAGCTGGT GGACAGCACC
TGCAAGGCGG CCGGGGTTGG TGTGGCTGAC CTGCACTCCA CCATGGGCCG TCTGGCAGCC
CGCGGCATCC GTGCCCACCT GCTGTCTGAC CTCTCTCTGG AATATCTGGA CAAACTGGTG
GACAACGTCG GCAAGGGTGA CAAGACCTAT GCCAACCACA CCGAGATCCC CTCCGGCGAG
CATCGCGGCG TCGGCTTCCA CGAAGCGCCC CGCGGCGTGC TGTCCCACTG GATGGTGATC
AAGAACAAGA AGATCAAGAA CTACCAGGCC GTGGTCCCCT CCACCTGGAA CGCCTCACCA
CGGGATGCCG AAGGCAATGC CGGTCCCTAC GAGGCCTCGC TGCTGGGCAA CCCGGTGGCC
AAACCGGATC AGCCATTGGA GGTACTGCGT ACCGTACACT CCTTTGACCC CTGCATCGCC
TGTGCGGTGC ATACGATTGA TCCGGAAGGG AAAGAGATCA CGAAGGTAAA AGTGGTGTAG
|
|---|
| Protein sequence | MARITIDPIT RIEGHLRIDV EVTGGQVSKA WSSAQMWRGI ETILKDRPPQ DAWIYAQRFC
GVCTTVHAIS SIRSVEHALK VEVPLNAQYI RNIIMAQHSV QDHIVHFYHL SALDWVDIVS
ALKADPKKAA SIAQSVSDWP GNSEKEFSDV QKRLKAFVDS GKLGIFASGY WGHPAMILPP
EINLIATAHY LKALDYQQKA AQAVAILGGK NPHIQNLCVG GVATALNMDN LATINMERIA
YLKALMTETR EFVKKVYYPD LLVIGKAYKD WFKHGKGVVN YLAVPEFAED TKNTSFALPG
GLIMGGDVAK ARIISTHQDQ QLIGSIKESV ACAWYEGKSS LHPWEGETKP DYTDFQENGK
YSWCKAPRID GKPIQVGPVA QLLAGYAAGN QRVRKLVDST CKAAGVGVAD LHSTMGRLAA
RGIRAHLLSD LSLEYLDKLV DNVGKGDKTY ANHTEIPSGE HRGVGFHEAP RGVLSHWMVI
KNKKIKNYQA VVPSTWNASP RDAEGNAGPY EASLLGNPVA KPDQPLEVLR TVHSFDPCIA
CAVHTIDPEG KEITKVKVV
|
|---|
| |