| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0144 |
|---|
| Symbol | |
|---|
| ID | 6368661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 134137 |
|---|
| End bp | 135267 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642675543 |
|---|
| Product | hydrogenase (NiFe) small subunit HydA |
|---|
| Protein accession | YP_001950400 |
|---|
| Protein GI | 189423223 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGT TAGGGCATTT TTTCGGCAGC GGGATCAGCC GCCGGGATTT TATCAAGACC
TGTGTGGCAA CAACGGCAGT CATGGGGCTG CCTTTCAGCA TGGCTGCCAA GGTGGCGGAA
GCCGCCCAGG CACCGGATCG GCCGCCGGTG ATCTGGCTGC ATTTTCAGGA GTGTACCGGC
TGTTCTGAGT CGCTGCTGCG GGCCAATCAC CCAGCTCCAG CCACCCTGCT GTTGGAGATG
ATCTCGCTGG ACTACCACGA GACCCTGATG GCCGGCTCCG GCCACCAGGC TGAGAAGTCG
CTGCACGACT CCATGAAGGC CAATCATGGC AAGTATATCC TGATCGTGGA AGGGGCGATC
CCCACCAAGG AGAACGGCAT CTACTGCAAG GTGGGTGGCA AGACCGCCCT TGAGTCCCTG
CGTAAGGCAG CCGAGGGGGC AGCCGCCATT ATCTCGGTCG GTACCTGCGC CAGCTACGGC
GGTATCCAGG CTGCCCCGCC CAACCCCACC GGCGCTGTGG GGGTGCGGGA TATCATCAAG
GACAAGCCGA TCATCAACAT CCCCGGCTGT CCGCCTTCCC CCTATAACCT GCTTTCCACC
GTGCTGTATT TCCTGACCTT TAAGAAACTG CCGGAACTGG ATCAGATGGG CCGTCCCAAG
TTTGCCTATG GCCGCCGGAT TCACGAACAT TGCGAGCGCC GTCCCCACTT TGATGCGGGA
CGTTTTGCCA AGGACTATGG CCATGAGACC CATGCCCAGG GCTACTGCCT CTACAAGCTG
GGTTGCAAGG GTCCGGCCAC CTATGCCAAC TGTTCGGTAC AGCGCTTTAA CGATGCCGGG
GTCTGGCCGG TCTCGGTGGG CCACCCCTGT ATTGGCTGTA CCGAGCCGGA TATTCTGTTC
CGTACCGCCA TTGCCGACAA GGTCCAGATC CACGAACCAA CGCCGTTTGA CAGCTATGCG
CCGGTGGATC TGAAGGATAA GGGCAAAGGG GCCAGCCCGG TTACCACCGG TGTGCTGGGC
TTGGCAGCCG GGGCCGCCCT GGGGGCCGGG GCCATGCTGG CCCGCAAGCT GCCGGATGCG
GAGCAACCTG CTGAACATGA GCAGGGAGGC GACCATGAGC ACAAAGAGTA G
|
|---|
| Protein sequence | MSQLGHFFGS GISRRDFIKT CVATTAVMGL PFSMAAKVAE AAQAPDRPPV IWLHFQECTG
CSESLLRANH PAPATLLLEM ISLDYHETLM AGSGHQAEKS LHDSMKANHG KYILIVEGAI
PTKENGIYCK VGGKTALESL RKAAEGAAAI ISVGTCASYG GIQAAPPNPT GAVGVRDIIK
DKPIINIPGC PPSPYNLLST VLYFLTFKKL PELDQMGRPK FAYGRRIHEH CERRPHFDAG
RFAKDYGHET HAQGYCLYKL GCKGPATYAN CSVQRFNDAG VWPVSVGHPC IGCTEPDILF
RTAIADKVQI HEPTPFDSYA PVDLKDKGKG ASPVTTGVLG LAAGAALGAG AMLARKLPDA
EQPAEHEQGG DHEHKE
|
|---|
| |