| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0045 |
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| Symbol | |
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| ID | 6369111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 46083 |
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| End bp | 48077 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642675446 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001950303 |
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| Protein GI | 189423126 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCT CTCTGAAATA CCGGATCGCT CTGGTGGTCT TTGTGCTGCA GGTGGCCATC
TTTTCTCCGC TGCTCTGGTT TACCTTTACC GCCTACCGGG ATGCTGACCT GCAACAACTG
CAGACTCGTG AAGATGTCTT TATGAGGCTG GTCTCCCAGT TGGGGCGCAA GGCGCTCCTG
ACGGCCGAGC CGACCGATTT TCAACTGTTT ATCGCTCCGT TCAGCAAAGA TTCCCATATC
AACCGGATCA TTTTGCTGAA CCAGTCCGGC ATTGTGGTTG CCAGTACCGC GCCCGTGGAT
CTGGGCGGAC CACTGCCGGT GCAGAAAAAT GAACGGAATA CCGTCTGGAA GACCAGCGAG
ATTGCCAATG CCACCGAGCA GCTGGGGGCC ATTACGGTTC ATTTTTCCCG GGCCGAACTG
GATAAAAAAG TTGAGGCCCT GGTCAAGCGC GGCATCCCGA TTGCCGTGGC CGGTATCATA
CTGAGCGCCC TGGTGGGGTT GGGACTGGGA TCGCTGCTGA CCCGCAGGCT GAAGGCACTT
GAGCAGGCCA CCCGCCGGAT GGGGGCAGGG GATATGGAGG TCACCGTTGC GATCTCGGGC
AATGACGAGG TGGCACACCT TGCCCAGGTC TTCAACGAGA TGTCCGGCAG TCTGCGTTCA
CAGTTTGATG AACTGCAGCA GGTCCAGCAG GAATTGTCCT TTCAGGCGCA GCATGATCCC
CTGACCGGCC TGCCCAATCG CCTGCTGTTT GACCTGCGCT GCAGCCAGGC CATCGCAACC
GCCCGGCAGC ACAAGCAGTT GCTGGCGCTG CTGTTCTTTG ATCTGGACCA TTTCAAGAAC
ATCAATGACA GCTACGGCCA TCAGGTGGGG GATGCGGTAT TGCGTTGCGT GGCTGCCCGC
CTGACCATGG CCTTGAAAGA CCATAACCTG ATCGCCCGTC TGGGTGGGGA TGAGTTCTGT
GTCCTGATTG AGCAGCTCGA ACAGGAACAG GAGGCTGCCG CTGTTGCCGA ATCGGTCCTG
CATATGCTGA CCGTGCCGCT GGAGTGTGAA CAGCATGAAT TCTTCCTTTC TGCCAGTATC
GGCATCTGCC TTTATCCCCG GGACGGCGAT GACGAGGTCA GGTTGCTGCG CAACGCCGAT
ACGGCCATGT ACCGCGCCAA GGCAGCCGGT CGGGGGGGGT ACCGCTTCTA CTCCCATGAA
CAGACCTCAT CGGTGCAGGA ACGGACTTCA CTGGAACAAC GTCTGCGCAA GGCGATCGAA
CGTGGTGAGC TGCGGCTGAA CTATCAACCC CAGGTCTGTC TGACCACCGG CAATCTGGTC
GGGGTCGAGG CGTTGGCGCG CTGGTCAAGT CCGGAGTTCG GACTGGTGGC CCCGGAAAAA
TTCATTCCGA TTGCGGAAGA GAGCGGCCAG ATCCTGGCGA TGGGTGAGTG GATTCTGGAC
GATGCCTGCC GCCAGATGCA GAAGTGGCGC AGGGATGGTT CAACCATCCC CCGTGTGGCG
GTCAACCTCT CCGCGCTGCA GATCCAGCGC AGCGATATTG CCACCCTGGT CCGCCGCACC
CTGGACAGCA CCGGTCTGCC TGCCAACTGT CTGGAGCTGG AGATCACGGA AGGCTATATC
CTGCAGGATG CTGACCGGGC GGTGGCGGTG CTGCAGCAGC TGCGCGATCT GGGGGTCTCG
ATTGCCATCG ATGACTTCGG CACCGGTTTT TCATCGCTGT CATACCTGCA CCGTCTGCCG
ATCGACCGGC TCAAGATCGA CAAATCCTTT GTACAGGAGA TCGGCTCCAC CTCACGGGCG
GCCCAGGTGG CCCAGGCCGT GGTCAGCCTG GGCAAGACCC TGGGATTATC CATCATCGGT
GAGGGGGTCG AGCAGCTCCA CCATGCCAAT GCGCTGCGGG AGTGGGGCTG CCATGAAGGC
CAGGGTTTCC TGTACGCCCC CGCCCTTGCC CCGGATCAGC TGCACCTGCT GGCACCGTTC
AAGAGGCTGC CATGA
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| Protein sequence | MTISLKYRIA LVVFVLQVAI FSPLLWFTFT AYRDADLQQL QTREDVFMRL VSQLGRKALL
TAEPTDFQLF IAPFSKDSHI NRIILLNQSG IVVASTAPVD LGGPLPVQKN ERNTVWKTSE
IANATEQLGA ITVHFSRAEL DKKVEALVKR GIPIAVAGII LSALVGLGLG SLLTRRLKAL
EQATRRMGAG DMEVTVAISG NDEVAHLAQV FNEMSGSLRS QFDELQQVQQ ELSFQAQHDP
LTGLPNRLLF DLRCSQAIAT ARQHKQLLAL LFFDLDHFKN INDSYGHQVG DAVLRCVAAR
LTMALKDHNL IARLGGDEFC VLIEQLEQEQ EAAAVAESVL HMLTVPLECE QHEFFLSASI
GICLYPRDGD DEVRLLRNAD TAMYRAKAAG RGGYRFYSHE QTSSVQERTS LEQRLRKAIE
RGELRLNYQP QVCLTTGNLV GVEALARWSS PEFGLVAPEK FIPIAEESGQ ILAMGEWILD
DACRQMQKWR RDGSTIPRVA VNLSALQIQR SDIATLVRRT LDSTGLPANC LELEITEGYI
LQDADRAVAV LQQLRDLGVS IAIDDFGTGF SSLSYLHRLP IDRLKIDKSF VQEIGSTSRA
AQVAQAVVSL GKTLGLSIIG EGVEQLHHAN ALREWGCHEG QGFLYAPALA PDQLHLLAPF
KRLP
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