| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2516 |
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| Symbol | |
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| ID | 6355135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 2755889 |
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| End bp | 2756719 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642670104 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_001944513 |
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| Protein GI | 189347984 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.258607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTATA ACAATCAGCC ATACAGCCCC GGGGGATTTC AGGTTATGCC CCCGGCCATC
AAAACCATCA TTCTGGCAAA TGTTGCGGTC TTTCTGTTCC AGATCTCCCC TTTCGGAGCG
TTTATTACCG CTGCCGGAGC GCTGTGGCCT CTTGCTTCCG AAAATCAGGT GGGCGTTTCG
TTCCAGATAT GGCAGCCGGT GACCTACATG TTTCTGCACG GCAGCTTCGG GCACCTCTTT
TTCAATATGT TCGCGCTTTG GATATTCGGT GCGGAACTCG AAAATTACTG GGGGACCAGG
CAGTTCAACA TCTATTACTT CGTCTGCGGC ATTGGAGCCG CAGTAATCAA CCTGCTCACG
ACCATAGGAG ACGCCTATCC GACGGTAGGA GCATCGGGAG CAATTTACGG TGTCCTGCTC
GCTTTCGGCA TGATGTTTCC AAACCGTTAC ATCTTCCTGT ATTTTCTTTT CCCCATTAAG
GCAAAGTATT TTGTCGCCGG ATATGCAGCC ATAGAATTCC TGTCAGGACT TGGCAGCAGA
ACGATGGGAA GCGGCAGCAA CATAGCTCAC TTTGCCCATC TCGGAGGCAT GCTGATCGGG
TTCCTCTACA TCATCATCAG GAGACAGGGC TGGACCCTGA AACAATGGAC CGGGAAGTTA
CAACCGGTAA AAAAGAATCC CAGGCAGGCG GCAATACACC ATATCAACGA AAGAGACAAA
CCGGTACCGG AGGAAGAGAT CGATGCAATT CTTGACAAAA TCTCCAGCAA AGGCTATGAA
TCGTTGAGTA ACGAGGAAAA ACGAAAGCTC CTGAAGGCTG GAGGAAAATA A
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| Protein sequence | MNYNNQPYSP GGFQVMPPAI KTIILANVAV FLFQISPFGA FITAAGALWP LASENQVGVS
FQIWQPVTYM FLHGSFGHLF FNMFALWIFG AELENYWGTR QFNIYYFVCG IGAAVINLLT
TIGDAYPTVG ASGAIYGVLL AFGMMFPNRY IFLYFLFPIK AKYFVAGYAA IEFLSGLGSR
TMGSGSNIAH FAHLGGMLIG FLYIIIRRQG WTLKQWTGKL QPVKKNPRQA AIHHINERDK
PVPEEEIDAI LDKISSKGYE SLSNEEKRKL LKAGGK
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