Gene Clim_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2482 
Symbol 
ID6354752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp2721799 
End bp2722821 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content52% 
IMG OID642670070 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001944480 
Protein GI189347951 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACTC TTCGCATTTT AAGCGGGATG CGGCCGACCG GAAAACTGCA CCTTGGACAC 
TACACCGGCG CACTTGAAAA CTGGGTTCAC CAGCAGAACC TCCTTGCAGA AGACGGCTCA 
AGAGTTTATG AAACCTGCTT TCTCATTGCG GACTATCATA TTCTGACCAC ATCGCTGGAA 
ACTGCCGACG CTTACCAGCA CACCATCGAT ATGCTGATGG ACTGGCTTGC CGCGGGAGTG 
GATCCGGAAA AAAGCCCTGT TTTCCGGCAG TCGCAGGTCA AGGAGCATGC GGAGCTGTTT 
CTCCTTTTCG CCATGCTGAT AACCTCATCG AGACTTGAAC GGAACCCGAC ACTGAAGGAA 
CAGGTTCGCG ACCTGAACAT GGACTCCCTG ACGTACGGAC ATCTCGGATA TCCGGTTCTG 
CAGGCTGCGG ACATACTGCT CTACAAGGGA AATATCGTAC CGGTAGGCGA AGATCAGATC 
CCGCATGTTG AAATAACCAG AGAGATCGCC CGTAAATTCA ATTTCCACTA CCCTCATCCT 
GAAACCGGAA ACGTTTTTCC GGAGCCTGAG CCGAAAATCA CGAAATTTTC AAGGCTGGTA 
GGCCTCGACG GCAAAGCAAA AATGTCAAAA TCGCTCGGCA ACACGATACT GCTTTCCGAC 
ACGCCTGAAG AGGTGCTCAA AAAAGTCAGA AACGCCGTAA CGGACACCTT GAAAGTCAGA 
AGAAACGATC CCGGACGTCC GGAAGTCTGT ACGGTCTTCA GCTACCATAA ACGGTTTACT 
GCCCAGGGGG AGCTTGATTC CATCGAAACC GGATGCCGTT CAGGCGCTCT CGGTTGCGTT 
GACTGCAAAA AGCTCTGCGC CGCCGCGATA TCGGCGGAAC TTGAACCGCT TCTTGAAAAA 
CGCCGCTACT ATGAGGACCG GATAGAGCTT GTCCGGAATA TTCTGCTCGA AGGCGAAATA 
AAAGCCCGTA CTATAGCCTC GCAAACCATG CAGGAAGTCC GGACAGCCAT GAAGCTTGGA 
TAA
 
Protein sequence
MGTLRILSGM RPTGKLHLGH YTGALENWVH QQNLLAEDGS RVYETCFLIA DYHILTTSLE 
TADAYQHTID MLMDWLAAGV DPEKSPVFRQ SQVKEHAELF LLFAMLITSS RLERNPTLKE 
QVRDLNMDSL TYGHLGYPVL QAADILLYKG NIVPVGEDQI PHVEITREIA RKFNFHYPHP 
ETGNVFPEPE PKITKFSRLV GLDGKAKMSK SLGNTILLSD TPEEVLKKVR NAVTDTLKVR 
RNDPGRPEVC TVFSYHKRFT AQGELDSIET GCRSGALGCV DCKKLCAAAI SAELEPLLEK 
RRYYEDRIEL VRNILLEGEI KARTIASQTM QEVRTAMKLG