Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2338 |
Symbol | |
ID | 6355684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 2569101 |
End bp | 2569934 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642669930 |
Product | UspA domain protein |
Protein accession | YP_001944340 |
Protein GI | 189347811 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACA TACTCGTGCC GACCGATTTT TCCTCACATG CCATGGCGGC TTTTGAAACC GCAGTCTCGC TGTCCCGCAG AACAGGAGCA CAGGTGTACC TTTACCATGT GATTGAAGTT CCTGAAGTTG CGGAAATGCA TGAGCTGATG GCATGGCGGG AATCCGGCGG TGAAGGAAGC ATGGAGAGCG CGGACGGCAT GCTTCGTCAA CTGGTAATGA ACGAAGCGTA TCACGATATC CGCCCCGTAT ATTCCATCGA CTACGGAACC CCTCACAAAT GCATCAGTGC GAAGGCTGCC GGAGAAGGGT TCGACCTTGT GGTCATCGGA AGCCATGGGA TGAGCAGAAT AGACAAAATT ATTTTTGGGT CGACCACGGA AAAGGTCATC CGCAATACGC TCTGCCCTAT ACTGACCATC AACGATACGA TTTCCTGCTT CCAGCCCTCG ACTATCGTCT TCTGTGCTGG CATTGCTGCG GAGCAGGCCT GCGGACTTGA GACCGTCAAA TCGATATCAC TGCTCTACAA TGCCGTGATT CACATCGTAA AAGTCTCGAC TCCAGAGCAT TTCGAAACCA CCCGACAGTC ACGAATGGCG ATGAAAACCT TCGCCGAAAC AAACAAACTG GCGGAGTATA CCCTGAACCA CTACAACGAC CGGAGCGTCG AGGAAGGCCT TAAGCATTTT GCTGAAGACA TCAACGCCGA CATGCTCTGT ATGCCGACAC ACGGCTCCTC GGGGATTCGT CACCTCTTCA GAAAAAGCGT AACCGGGAGC GTAACCGGAC AGATCGCCAT TCCGGTTCTT ACCTGCAGGA TACCGGGAAC ATGA
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Protein sequence | MKNILVPTDF SSHAMAAFET AVSLSRRTGA QVYLYHVIEV PEVAEMHELM AWRESGGEGS MESADGMLRQ LVMNEAYHDI RPVYSIDYGT PHKCISAKAA GEGFDLVVIG SHGMSRIDKI IFGSTTEKVI RNTLCPILTI NDTISCFQPS TIVFCAGIAA EQACGLETVK SISLLYNAVI HIVKVSTPEH FETTRQSRMA MKTFAETNKL AEYTLNHYND RSVEEGLKHF AEDINADMLC MPTHGSSGIR HLFRKSVTGS VTGQIAIPVL TCRIPGT
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