| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2230 |
|---|
| Symbol | rpsJ |
|---|
| ID | 6355253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 2457121 |
|---|
| End bp | 2457432 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642669822 |
|---|
| Product | 30S ribosomal protein S10 |
|---|
| Protein accession | YP_001944233 |
|---|
| Protein GI | 189347704 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000010339 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGTAC AGCAAAAGAT AAGAATCAAG CTCAAGTCAT ACGACCATAG CCTGGTTGAT
AAATGGGCTT TACGGATTAT TGATGTGGTT AAGCAGACGG ATGCCATCAT CTTCGGTCCC
ATACCGCTGC CGACAAAAGC GCATATATAT ACGGTAAACC GTTCGCCGCA TGTCGACAAG
AAGTCCAGGG AGCAGTTTTC GTTCTCATCG CACAAGCGGT TGATCGAAAT CATCAATCCC
ACTACCAGGA CTATCGATAT GCTTATGAAG CTCGAGCTTC CAAGCGGTGT TGATGTTGAA
ATTAAGTCTT AA
|
|---|
| Protein sequence | MAVQQKIRIK LKSYDHSLVD KWALRIIDVV KQTDAIIFGP IPLPTKAHIY TVNRSPHVDK
KSREQFSFSS HKRLIEIINP TTRTIDMLMK LELPSGVDVE IKS
|
|---|
| |