Gene Clim_2229 details

Gene Information

• Locus tag: Clim_2229
• Symbol: rplC
• ID: 6355252
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 2456468
• End bp: 2457097
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 642669821
• Product: 50S ribosomal protein L3
• Protein accession: YP_001944232
• Protein GI: 189347703
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0000000790762
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGCGA TTCTTGGAAA GAAAATCGGC ATGACCCGTT TATACAATGA TAAACGCGAG 
GCGATATCCT GTACTGTTAT TCAGGCAGGT CCATGCTTTG TGACGCAGGT GAAAAGTGCA 
GAGAAGGATG GCTATGACGC TTATCAGATA GGTATAGGGG AAAGAGATGA GAAGAAAATA 
AACAAGCCTA TGCAGGGTCA TTACAGAAAG GCCGGAGTCA CACCAGGCTT TATGATGGCG 
GAATTCAAGA AAACCGAATT CAGTGAAAAT CTGGAGGCTG GCAATCCTGT CAGTGTGGAG 
TCTTTCAAGG AAGGCGAAAA GGTAAACGTT CTCGGTGTTT CGAAAGGAAA AGGTTTTGCC 
GGTGTTGTCA AACGTCATAA TTTCGGCGGC GGATCAAGAA CTCATGGTCA GTCGGACAGG 
TTGCGCGCCC CAGGTTCTGT TGGAGGATCT TCAGATCCCT CAAGAACGTT CAGGGGTACC 
AGGATGGCCG GACGTATGGG CGGAGATAAT ATTACGGTCA AGAATCTTGA GATAGTCAAG 
ATTATGCCGG AGTCAAATCT GCTGGTTATC AAAGGTGCTG TGCCGGGTCC GAAAAACTCC 
TACGTAAAGA TTGTTTCTAT AAAAAAGTAA 

 

Protein sequence

MGAILGKKIG MTRLYNDKRE AISCTVIQAG PCFVTQVKSA EKDGYDAYQI GIGERDEKKI 
NKPMQGHYRK AGVTPGFMMA EFKKTEFSEN LEAGNPVSVE SFKEGEKVNV LGVSKGKGFA 
GVVKRHNFGG GSRTHGQSDR LRAPGSVGGS SDPSRTFRGT RMAGRMGGDN ITVKNLEIVK 
IMPESNLLVI KGAVPGPKNS YVKIVSIKK