Gene Clim_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2226 
SymbolrplB 
ID6355249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2454608 
End bp2455402 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content50% 
IMG OID642669818 
Product50S ribosomal protein L2 
Protein accessionYP_001944229 
Protein GI189347700 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.49007e-12 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATACC CTGGATTTGA CGAGATCACA AAAAGTGAGC CTGAAAAAAG TCTTCTCGTA 
CCGATCAAGA AGAGCGGTGG CCGTAACAGC GCGGGAAGAA AAACCTCGAG ACACAGAGGC
GGCGGACATA AACGCCATTA CAGGATCGTC GATTTCAAAA GAAACAAGGA TGGGATCCCT
GCTTTGGTCG CATCTATCGA ATATGATCCG AATCGTTCAT CAAGAATTGC ATTATTGCAT
TACAATGATG GAGAAAAACG TTATATTCTC GCCCCGAAAG GTTTGAACGT GGGCGACAAG
GTAGAAAGCG GCGAGAAGGT GGAGATCAAG GCCGGCAATA CCATGCCGCT GAAAAACATC
CCTCTCGGCA CCGATATCCA CAATGTGGAA ATGAAGGCTG GAAAGGGTGG TCAGATCGTT
CGTTCAGCAG GAGCTTTCGC AGTTCTTGCA GCTCGTGAAG GAGATTATGC AACGCTCAGG
CTTCCTTCCG GTGAAATTAG AAAGGTAAGG GTCGAGTGCC GCGCCACGAT AGGGGTTGTC
GGTAACTCAG ATCATGAAAA TGTCGTTCTC GGCAAGGCTG GCAGAAGCCG CTGGCTTGGT
ATTCGTCCGC AGACGAGAGG TATGGCCATG AACCCTGTCG ATCATCCGAT GGGCGGTGGT
GAAGGTAAAT CGAAGTCAGG TGGCGGCAGA AAACATCCCA AGTCTCCATG GGGACAGCTC
GCCAAGGGTC TGAAAACGAG AAATAAAAAG AAAGCATCGA CAAAGCTTAT CGTCCGCGGC
AGGAATGCCA AGTAA
 
Protein sequence
MSYPGFDEIT KSEPEKSLLV PIKKSGGRNS AGRKTSRHRG GGHKRHYRIV DFKRNKDGIP 
ALVASIEYDP NRSSRIALLH YNDGEKRYIL APKGLNVGDK VESGEKVEIK AGNTMPLKNI
PLGTDIHNVE MKAGKGGQIV RSAGAFAVLA AREGDYATLR LPSGEIRKVR VECRATIGVV
GNSDHENVVL GKAGRSRWLG IRPQTRGMAM NPVDHPMGGG EGKSKSGGGR KHPKSPWGQL
AKGLKTRNKK KASTKLIVRG RNAK