Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2223 |
Symbol | rpsC |
ID | 6355246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2453117 |
End bp | 2453872 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642669815 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_001944226 |
Protein GI | 189347697 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000780693 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGTCAGA AAGTTAATCC TACTGGATTC AGACTTGGAA TTATCAAGGA CTGGACATCA CGCTGGTACG ACGACAGCCC TGTAATTTCG GAAAAAATCA AGCAGGATCA TGTTATTCGT AACTATGTGC TGGCAAGGCT GAAAAGAGAG AAAGCCGGTA TTGCTCGTAT CGTTATTGAA AGAACGACCA AGCACGTCAA GATAAATATT TATGCAGCCC GTCCGGGAGC AGTTGTCGGC AGAAAAGGCG AAGAGATCAA CAATCTTTCA CAGGAGCTGA CCCGTATTAC CGGAAAAGAG GTCAAGATAG ATGTTGTTGA AGTGATAAAG CCTGAGATCG AGGCGCAGCT TATAGGCGAT AACATCGCCT ACCAGCTTGA GAATCGCGTC TCTTTCAGAA GAGCCATGAA GCAGGCCATT CAGCAGGCGA TGCGTGCCGG AGCGGAAGGT ATCAGAATCA GATGCGCCGG ACGACTCGGT GGAGCTGAAA TTGCAAGAGC GGAACAGTAC AAGGAAGGAA AGATTCCGTT GCACACCATT CGTGCCAATA TTGATTATGC AAGCGTCACG GCACATACGA TTGCCGGTAC CATCGGAATA AAAGTGTGGG TTTATAAAGG TGAGGTTCTT GTACAGCGCA TCGATGCCAT AGAAGAAGAC GAGATGAAGC GGATGAAAGA TCGCCGGGCA GATTCCAAAT CCAGGCCCCG TGATCCGCGC AGCAAGCGCC GCCGCAGCCG CACCAAGCGC GCATAA
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Protein sequence | MGQKVNPTGF RLGIIKDWTS RWYDDSPVIS EKIKQDHVIR NYVLARLKRE KAGIARIVIE RTTKHVKINI YAARPGAVVG RKGEEINNLS QELTRITGKE VKIDVVEVIK PEIEAQLIGD NIAYQLENRV SFRRAMKQAI QQAMRAGAEG IRIRCAGRLG GAEIARAEQY KEGKIPLHTI RANIDYASVT AHTIAGTIGI KVWVYKGEVL VQRIDAIEED EMKRMKDRRA DSKSRPRDPR SKRRRSRTKR A
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