Gene Clim_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2223 
SymbolrpsC 
ID6355246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2453117 
End bp2453872 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content49% 
IMG OID642669815 
Product30S ribosomal protein S3 
Protein accessionYP_001944226 
Protein GI189347697 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000780693 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTCAGA AAGTTAATCC TACTGGATTC AGACTTGGAA TTATCAAGGA CTGGACATCA 
CGCTGGTACG ACGACAGCCC TGTAATTTCG GAAAAAATCA AGCAGGATCA TGTTATTCGT
AACTATGTGC TGGCAAGGCT GAAAAGAGAG AAAGCCGGTA TTGCTCGTAT CGTTATTGAA
AGAACGACCA AGCACGTCAA GATAAATATT TATGCAGCCC GTCCGGGAGC AGTTGTCGGC
AGAAAAGGCG AAGAGATCAA CAATCTTTCA CAGGAGCTGA CCCGTATTAC CGGAAAAGAG
GTCAAGATAG ATGTTGTTGA AGTGATAAAG CCTGAGATCG AGGCGCAGCT TATAGGCGAT
AACATCGCCT ACCAGCTTGA GAATCGCGTC TCTTTCAGAA GAGCCATGAA GCAGGCCATT
CAGCAGGCGA TGCGTGCCGG AGCGGAAGGT ATCAGAATCA GATGCGCCGG ACGACTCGGT
GGAGCTGAAA TTGCAAGAGC GGAACAGTAC AAGGAAGGAA AGATTCCGTT GCACACCATT
CGTGCCAATA TTGATTATGC AAGCGTCACG GCACATACGA TTGCCGGTAC CATCGGAATA
AAAGTGTGGG TTTATAAAGG TGAGGTTCTT GTACAGCGCA TCGATGCCAT AGAAGAAGAC
GAGATGAAGC GGATGAAAGA TCGCCGGGCA GATTCCAAAT CCAGGCCCCG TGATCCGCGC
AGCAAGCGCC GCCGCAGCCG CACCAAGCGC GCATAA
 
Protein sequence
MGQKVNPTGF RLGIIKDWTS RWYDDSPVIS EKIKQDHVIR NYVLARLKRE KAGIARIVIE 
RTTKHVKINI YAARPGAVVG RKGEEINNLS QELTRITGKE VKIDVVEVIK PEIEAQLIGD
NIAYQLENRV SFRRAMKQAI QQAMRAGAEG IRIRCAGRLG GAEIARAEQY KEGKIPLHTI
RANIDYASVT AHTIAGTIGI KVWVYKGEVL VQRIDAIEED EMKRMKDRRA DSKSRPRDPR
SKRRRSRTKR A