Gene Clim_2214 details

Gene Information

• Locus tag: Clim_2214
• Symbol: rplF
• ID: 6355236
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 2449363
• End bp: 2449902
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 642669805
• Product: 50S ribosomal protein L6
• Protein accession: YP_001944217
• Protein GI: 189347688
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000000375197
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAA TAGGAAAAAT GCCGATATCC CTGAGCAATC AGGCGAAGAT AGAGATCAGT 
GATGCCAATG TAAAGGTGAC CGGCCCGAAA GGTACACTCG AGCAGGCTCT GGTTGCACAG 
GTAACCCTGC AGGAGGAGAA CGGCGTTGTT ACGGTGCAGA GGGTTGACGA GACCAAAAAG 
TCCAAAGCTA TGCACGGTCT TTACAGGATG CTTATCAGCA ATATGGTTGA GGGTGTCACA 
AAAGGATTTA CCAGAAAACT CGAGATTGCC GGTGTCGGTT ATCGCGCAGA GCTTAAAAAC 
GATCTCCTGG CTCTTACGCT GGGATATTCG CATATGATTT ATTTCAAGGC TCCGGACAGC 
ATCAAAATTG AGGTGCCCGA CCAGACCACT ATTCTTATCA GCGGTATTGA CAAAGCCCTT 
GTTGGTCAGG TTGCCGCAAA AATACGTTCG TTCCGCAAGC CTGAGCCGTA CCGAGGCAAA 
GGTATCAAGT ACGAAGGTGA GGTGATCCGC CGCAAGGAAG GTAAGGCAGC CGGTAAGTAA 

 

Protein sequence

MSRIGKMPIS LSNQAKIEIS DANVKVTGPK GTLEQALVAQ VTLQEENGVV TVQRVDETKK 
SKAMHGLYRM LISNMVEGVT KGFTRKLEIA GVGYRAELKN DLLALTLGYS HMIYFKAPDS 
IKIEVPDQTT ILISGIDKAL VGQVAAKIRS FRKPEPYRGK GIKYEGEVIR RKEGKAAGK