| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2209 |
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| Symbol | secY |
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| ID | 6355231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2446256 |
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| End bp | 2447587 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642669800 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001944212 |
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| Protein GI | 189347683 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000211329 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCTTA CTGAAAGTAT ACGCAATATC AATAAAATCC CTGAGCTTCG GCAGCGGATC
CTCTATACAC TGCTTCTCCT GTTTATCTAC AGGCTTGGTT CTCACATTAC GATACCTGGT
GTCGATGCGT CTGCAGTTGC CGGCGCATCT CCCTCCCATT CGAACGATCT TTTCGGTCTC
TTCGATCTTT TCGTCGGAGG AGCATTCGCA AGAGCTTCGA TATTCTCTCT CGGTATCATG
CCCTACATTT CGGCATCCAT CATCGTTCAG CTGCTCGGCG CTGTAACACC CTATGTACAG
AAGCTGCAGA AAGAGGGTGA AGAGGGTCGT CAGAGAATCA ATCAGATGAC ACGCTATGGC
ACGGTGCTCA TTGCTGCCCT GCAGGCATGG GGGGTAAGCG TCAGTCTTGC CAGTCCGGCT
TCGTTCGGTA CGGCTGTAGT TCCCGATCCC GGCTGGTTTT TCACCTTTAC TGCCGTTGTC
GTGCTTACGG CTTCCACTGT GTTTGTCATG TGGCTTGGAG AACGGATTAC CGAGCGAGGT
ATCGGTAACG GTATTTCTCT CATCATCATG ATCGGTATTC TCGCCCGTTT TCCGCAGTCG
CTGGTGGCCG AGTTTCGTTC GGTTTCACTC GGCAGCAAGA ACTGGATTGT CGAGATAATC
ATTATAGCCA TGATGGTTGC CATCGTTGCA TTTGTCGTCG TGCTTACGGT AGGTACCCGA
AGGGTTCCCG TTCAGCATGC GAAACGTGTC GTCGGCAGAA AAGTCTATGG CGGAAGCACT
CAGTATATTC CCATGCGCAT CAATACGGCC GGGGTTATGC CGATCATTTT CGCTCAGTCC
ATCATGTTCC TTCCGGGAAC CTTCGTCTCG TTTTTTCCTG AAAACGAAGT GATGCAGAGT
ATTTCAAGTG CGCTTGCTTA TGATTCGTGG TGGTATGCAC TCATATTCGG CACCATGATC
GTTTTCTTTA CCTACTTCTA TACAGCTATT GCCTTCAATC CCAAGGAGGT CGCCGATACC
ATGCGCCGCC AGGGCGGATT TATTCCAGGC GTGAGACCTG GTAAAAGCAC AGCGGATTTT
ATCGATAACA TTCTGACACG TATTACGCTT CCGGGAGCCA TATCGCTTGC CATCATTGCC
GTATTGCCTA CTTTTCTGAC AAAGTTCGCA AATGTCACTC CCGGGTTTGC CCAGTTTTTC
GGTGGTACCA GTCTGTTGAT TATTGTAGGT GTCGGACTCG ATACCCTGCA GCAGGTGGAA
AGCCATCTGC TTATGCGTCA CTATGACGGG TTTATGAAGA CCGGTAAAAC AAGAGGCCGT
CAGAGGCCTT GA
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| Protein sequence | MKLTESIRNI NKIPELRQRI LYTLLLLFIY RLGSHITIPG VDASAVAGAS PSHSNDLFGL
FDLFVGGAFA RASIFSLGIM PYISASIIVQ LLGAVTPYVQ KLQKEGEEGR QRINQMTRYG
TVLIAALQAW GVSVSLASPA SFGTAVVPDP GWFFTFTAVV VLTASTVFVM WLGERITERG
IGNGISLIIM IGILARFPQS LVAEFRSVSL GSKNWIVEII IIAMMVAIVA FVVVLTVGTR
RVPVQHAKRV VGRKVYGGST QYIPMRINTA GVMPIIFAQS IMFLPGTFVS FFPENEVMQS
ISSALAYDSW WYALIFGTMI VFFTYFYTAI AFNPKEVADT MRRQGGFIPG VRPGKSTADF
IDNILTRITL PGAISLAIIA VLPTFLTKFA NVTPGFAQFF GGTSLLIIVG VGLDTLQQVE
SHLLMRHYDG FMKTGKTRGR QRP
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