Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2090 |
Symbol | |
ID | 6355068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2306977 |
End bp | 2307768 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642669686 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_001944098 |
Protein GI | 189347569 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGATG TACCGCCAGT AAGCAAGGCG AAACTGAAGC TGTACGGCAA ACTGCACCAG AAAAAATACC GTGACAGCGA GGGTCTCTTT TTTACCGAAG GGTTTCGCAC GGTAAGCGAA CTTCTTGAAG CTCTTCCTGA ACCCGGTCTG CTCGATGCAT TGCTGTTCAG GGAGGGAGAG CAGGCCGCAG AGGGTTTTTA TGGCAGTTAT TCCGGCAGGG TGTTTACGCT TACGGAAAAG GAGTGTGCCC GGTTGAGCCA GACTGCGACA CCGTCGGGAA TTTTCGGTGT GTTCCGCCAG CAATCTGCGC TTCCTTTCGA ACCGGAACGG ACAGATGGAA GTTCCCTGAT TGTTGCGCTT GACGATGTGC AGGATCCCGG AAACGCAGGT ACCATTCTGA GAACCGCGGC ATGGTTCGGC GCCGATGCCA TGATCTGCAG CGCCGGTACA GCCGACCGGT ACAACGCGAA AGCGGTGCGT TCTTCCGCAG GGAGCATTTA TGCGTTACCG CATTATGGCG TGGATTCGCT TGAAACGGAA CTTCTTCGGC TTGCCGGGCG GGGATATGCC GTTATCGCCT CGTCGCTTGC CGGCCAGGAT TTTCGGGAGT TCACCTCATG GCCTGAAAAG CAGGTGCTCG TGATCGGCAA CGAAGCCAAT GGCGTGAGTC GGCCGGTTCA GGCGCTTGCC GGGAGGCTTG TGCGAATTCC GCATATCGGT TCGAAACCTC GCGTCGAATC GCTCAACGCA TCGGTTTCCG CGGCGATACT GATGGAGCGC CTCGTGCTCT GA
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Protein sequence | MHDVPPVSKA KLKLYGKLHQ KKYRDSEGLF FTEGFRTVSE LLEALPEPGL LDALLFREGE QAAEGFYGSY SGRVFTLTEK ECARLSQTAT PSGIFGVFRQ QSALPFEPER TDGSSLIVAL DDVQDPGNAG TILRTAAWFG ADAMICSAGT ADRYNAKAVR SSAGSIYALP HYGVDSLETE LLRLAGRGYA VIASSLAGQD FREFTSWPEK QVLVIGNEAN GVSRPVQALA GRLVRIPHIG SKPRVESLNA SVSAAILMER LVL
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