| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2088 |
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| Symbol | |
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| ID | 6355066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 2303608 |
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| End bp | 2306019 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642669684 |
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| Product | peptidase S16 lon domain protein |
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| Protein accession | YP_001944096 |
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| Protein GI | 189347567 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACAC CTGCCGCACT GCATCCCGAT AAACTCTACA GGAAATGCGA TCCGCTGGAG
TTTACGTTCA CAACTACCGA AGAGCTTGAC GGACCGCTTG AAATAACCGG TCAGGAGCGC
GCACTTGACG CCATCAGGTT CAGCATGGGC ATCCTGCATG ACGGCTTCAA CCTGTTTGCG
CTCGGCCCGA ACGGAACGGG AAAACAGACC GCAGTCATGC ACTACCTCTC TGAAATCGCC
CCCCGGGCGG GAATCCCTGA CGACTGGTGC TACGTCTATA ACGTCGAAAA GCCCCGGCAT
CCCTCGGCGC TCAGGCTTCC GGCCGGCAAA GCCTGCGCAC TCTCCCGCGA TATGGAACGC
CTTGTCGAAG CGCTCTTTAC CGTTCTTCCT GCGGCGTTCA GCAGCGAAGA GTACCAGGCA
CAGGAAAAAG CTGTCGGAGA ACAATTTCAG GAACGACAGA CCGAGGCGAT AGAAAAGCTC
GAAAAAAAAG CTGCCGAAAA CAATATCGCG CTTATCCGGA CTCCTGCGGG ATTCGCTTTC
GCTCCCGTAA AAAAGGGCGA AGTGATCAAA CCCGAGGAGT TCATGCTGCT GAAGGAGGGC
GAACGTGAAA CGATCGAAAA GGAAATCGCT TCCCTGAAAA ACGCCATGCA ATCAATCATG
GCCCAGATAC CAAAATGGCA GCGGGAAGCA CAGGAAAAAA TCAAGGAACT GAACCGGCAG
GTAGCCAATT TTGCCGTCAA ACCGCTTGTT GCGGAGCTGA AAAACAGTTA CAGTTCTCTC
AACCAGGTGA CGGCTTATCT GGAAACGACG GAAAACGACA TTATCGAACA TTTCGACCGC
TTTCTCGAAA AAGAGGGCGC CCCGCACGAG ATCTTTGCCG GCCTTTCGGC CACGAAAGGA
AGCTTTTTCA ACCGCTACAA GATTAACGTG CTTGTCGACA ACAGCCACTC GACCGGAGCA
CCGCTCGTAT TCGAAGACAA ACCTGCATGC CAGAACCTTG TAGGCGATAT CGAGCATCTC
TCGCAAATGG GCACCCTCGT CACGGACTTT ACGCTCATCA AGGCGGGAGC CCTGCACCGC
GCAAACGGCG GCTATCTGCT TATCGACGCG CGCAGGCTGC TCATCGAACC GCTTGCATGG
GAAGCCCTGA AAAAAGCCCT GCGAACCCGG CAGATCCGCA TAGAATCGCT TGCGCAGCTC
TACAGCCTCG TCAGCACCGT CTCGCTCGAA CCCGAGCCCA TACCGCTCGA GGTCAAAGTC
ATTCTGATGG GAGAGCGTTA CCTCTACTAT CTCCTTTCGA GCTACGACCC TGACTTCAGC
GAACTTTTCA AGGTTGCGGC GGATTTCGAG GACGATCTGC GCAATAACCC TGAAGGCAGG
TTCGCCTACG CCCGCACTAT CGCCGCCATC GTCGAGAAAG ACAGGCTTCG CCACTTTGAC
AGGGCAGCTG TAGCGAGAAT CGTCGAACAC GGGTGCAGAC TCGCAGGTGA CGCGACGAAA
CTCACCGCCC ACATGCAGAG CATCGCCGAT ATTGTCCGTG AAAGCGAATA CTACGCCCGT
GAAAACGACC GCGCCCTCGT CGTTGCCGAA GATGTGCAGC ATGCAATCGA CGCAAGGACC
GTCAGGGCGT CAAGAATCCG CGAGAAGCTC CGGGAAGCTA CCCTGAGAAA CACCATTCTT
ATCGACACGA CATCCGAAAA AACCGGACAG ATCAACGGCC TTGCCGTTTA CGCGCTGGGA
AACCAGAGCT TCGGCCATCC CGGAAAAATA ACCGCACGGG TGAGCCTCGG CAAGGGAGAG
GTGATCGATA TCGAGCGTGA AGTCGAAATG GGCGGCCCGA TCCACTCCAA AGGAGTGATG
ATTCTCTCCG GCTTTCTGGC CGCACGTTTC GGCATCCGGC AGCCCCTCTC ACTCTCCGCT
TCGCTGGTGT TCGAACAATC CTACAGCGGA GTCGAGGGAG ACAGCGCATC TTCGGCCGAA
CTTTACGCGC TGCTCTCCGC GCTCTCGGAA ACCCCCATCC GGCAATGGCT GGCCGTGACA
GGATCGGTCA ACCAGCATGG TGAGGTCCAG GCGATTGGCG GTGTCAACGA AAAAATAGAA
GGCTTTTTCG ACCTGTGCGC AGCACGGGGC CTCGACGGGA AACACGGCGT TCTCATACCG
GTCTCCAACA TCGACAATAT CATGCTCAGA AACGATGTCG TCGAAGCTGT CAAAGCTGGT
CTCTTTTCGA TCTACCCGGT CAGCCATATC GACGAAGGCA TTGAAATCCT CACCGGCATA
CCGGCAGGCG AAGCAGATGC AGACGGACTC TACCCTCCGG AGAGTGTCAA CGGGAAAGTA
CAGGCAAGAC TTCAGGAGAT GGCCCTGAAA CTGAAAAAAT TCAATGCGGA ATCAAACGGA
AACGACGATT AA
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| Protein sequence | MSTPAALHPD KLYRKCDPLE FTFTTTEELD GPLEITGQER ALDAIRFSMG ILHDGFNLFA
LGPNGTGKQT AVMHYLSEIA PRAGIPDDWC YVYNVEKPRH PSALRLPAGK ACALSRDMER
LVEALFTVLP AAFSSEEYQA QEKAVGEQFQ ERQTEAIEKL EKKAAENNIA LIRTPAGFAF
APVKKGEVIK PEEFMLLKEG ERETIEKEIA SLKNAMQSIM AQIPKWQREA QEKIKELNRQ
VANFAVKPLV AELKNSYSSL NQVTAYLETT ENDIIEHFDR FLEKEGAPHE IFAGLSATKG
SFFNRYKINV LVDNSHSTGA PLVFEDKPAC QNLVGDIEHL SQMGTLVTDF TLIKAGALHR
ANGGYLLIDA RRLLIEPLAW EALKKALRTR QIRIESLAQL YSLVSTVSLE PEPIPLEVKV
ILMGERYLYY LLSSYDPDFS ELFKVAADFE DDLRNNPEGR FAYARTIAAI VEKDRLRHFD
RAAVARIVEH GCRLAGDATK LTAHMQSIAD IVRESEYYAR ENDRALVVAE DVQHAIDART
VRASRIREKL REATLRNTIL IDTTSEKTGQ INGLAVYALG NQSFGHPGKI TARVSLGKGE
VIDIEREVEM GGPIHSKGVM ILSGFLAARF GIRQPLSLSA SLVFEQSYSG VEGDSASSAE
LYALLSALSE TPIRQWLAVT GSVNQHGEVQ AIGGVNEKIE GFFDLCAARG LDGKHGVLIP
VSNIDNIMLR NDVVEAVKAG LFSIYPVSHI DEGIEILTGI PAGEADADGL YPPESVNGKV
QARLQEMALK LKKFNAESNG NDD
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