| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2016 |
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| Symbol | |
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| ID | 6355520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2233909 |
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| End bp | 2235930 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642669614 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001944027 |
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| Protein GI | 189347498 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGAG CGATGGCTGC AGATGAGATC GCAAGGCTTC GGAAGGAGAT AGAGCGGCAT
AACTATCTGT ACTATGTCGA GGCCGAACCG GTTATTTCCG ATTACGAGTT CGACAGGCTG
CTCGAGCAGC TGATCGCGCT TGAACGCCTT CATCCCGATC TGGTAACCCC CGACAGCCCT
TCGCTGAGGG TCGGAGGGCA GATCACCAGG AGCTTTCCGT CTGTCCGTCA TCGCGAGCCG
ATGCTGAGTC TCTCCAACAC CTACTCGATG GAGGAGGTGG CCGATTTTTA CCGCCGGGTA
AGAAGGCTGC TGCTGGATGA AGGTATCGGG GAGCAGGAGA TGGTTGCCGA GCTCAAGTTC
GATGGCGTTG CCGTAAGCCT GATCTACCGT AACGGTTTGC TGGTGCAGGG AGCGACAAGG
GGAGACGGTG TTCAGGGGGA TGACATTACC GTCAACCTCA GGACGATTTC CTCCATTCCG
CTGCGTCTTG AAACTTCTGC TTCGGAAACG CTTTCGGGCA GTGACCGGGA GATCGAGGTG
CGGGGGGAGG TGTTTATGCC GAAGGAGGAC TTTGACCGTC TGAACGAGGG GCGGCCCGAA
GAAGATCGGT TTGCCAATCC CCGTAACGCC ACGGCAGGAA CGCTCAAACT GCAGGACTCT
GCCGAAGTGG CACGCCGACG GATGACCTTT GTGGCGTATT TTCTCAAAGG CATCGGCGAT
CAGCACATGC CTCATTTCGA TCGCCTGAAG CTGCTCGGAA AGCTCGGGTT CTTTACAGGA
GACCATTACC GGCTCTGTCC GGAACTGCAT GATATCGAAC GCTTTATCGG AGAGTGGTCG
GAAAAGCGCT GGAAGCTGCC TTACGAGACC GACGGGGTGG TTTTAAAGCT CAATGCCGTA
TGGCTCTGGG AGCGGCTTGG TGCTACATCC AAAAGTCCCC GCTGGGCTAT TGCCTACAAG
TACCCTGCGC AGCAGGCCAT TACCGAGTTG CTCGGCGTGG TGTTTCAGGT AGGAAGGCTC
GGCACGATCA CTCCCGTTGC CGAACTCAGA CCGGTGAAGC TTGCCGGTTC TACGGTATCC
CGTTCCACCC TGCATAATTT CGATGAGATC GAACGACTCG GTGTTCGGGT TCATGACCGG
GTAGTCGTTG AAAAATCCGG AGAGGTGATT CCCAAGATCA TCCGGGTGGC TGAAGATTCC
GGTTCGTTGT TCAGCGTACC GATCGTCGTT CCTGAACGCT GTCCTTCGTG CGATACGCCG
CTGACAAGGC CGGAGAACGA GGTGAGCTGG TACTGTCCGA ATGAAGAGGG ATGCCCGGCA
CAGATCAGGG GGCGGATGCT GCATTACGCT TCGCGCAACG CCATGGATAT TCAGTCGCTC
GGCATCGCGC TGGTCGATCA GCTGGTCGGC AGGGGGCTGG TGAAGGATCC GGGAGATCTC
TACTCGCTTC AGCTTCCGCA GCTTGAGCCG CTTGAACGCA TGGGCACGAA ATCTTCCATC
AATCTGGTAC GGGCTATCGA GGAGAGTCGA ACGAAAAGTT ATGACCGACT GCTCTACGCG
CTCGGTATCC GCCATGTCGG CCAGGCCACC GCAAGGGAAC TCGCCGGAGC GTATCCGTAT
TTTGCCTCGC TGCATGAGGC CGGTGAACAG GAGCTTGCCG AAGTGCCGGA TATCGGCCCT
GTTGTCGCTC GCAGCATTAT CGACTTTTTC TCAAAGCCCT GGGTGCAGGC AATGCTCGAC
AAGCTTGAAC AAGCCGGATT GCCGATGCGG GCAGGGAAGG AAAAAGAACA GGTCAACAAC
AACTTCGAAG GTCAAAGCGT CATTTTCACC GGCGGTCTCG AACGTCACGT CCGCCAGGAA
GCGGAAGAGA TGGTGCGCGA GCGCGGTGGC AGAATCGTCA GTTCGGTGAG CAAAAAGACG
TCGCTCGTTG TGGCGGGCAA GGAGGCAGGC AGCAAGCTTG AGAGGGCGCT GAAGCTCGGC
GTGAGGGTGA TCGGAGAGGA TGAATTTGAA GCAATGCTAT AA
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| Protein sequence | MDRAMAADEI ARLRKEIERH NYLYYVEAEP VISDYEFDRL LEQLIALERL HPDLVTPDSP
SLRVGGQITR SFPSVRHREP MLSLSNTYSM EEVADFYRRV RRLLLDEGIG EQEMVAELKF
DGVAVSLIYR NGLLVQGATR GDGVQGDDIT VNLRTISSIP LRLETSASET LSGSDREIEV
RGEVFMPKED FDRLNEGRPE EDRFANPRNA TAGTLKLQDS AEVARRRMTF VAYFLKGIGD
QHMPHFDRLK LLGKLGFFTG DHYRLCPELH DIERFIGEWS EKRWKLPYET DGVVLKLNAV
WLWERLGATS KSPRWAIAYK YPAQQAITEL LGVVFQVGRL GTITPVAELR PVKLAGSTVS
RSTLHNFDEI ERLGVRVHDR VVVEKSGEVI PKIIRVAEDS GSLFSVPIVV PERCPSCDTP
LTRPENEVSW YCPNEEGCPA QIRGRMLHYA SRNAMDIQSL GIALVDQLVG RGLVKDPGDL
YSLQLPQLEP LERMGTKSSI NLVRAIEESR TKSYDRLLYA LGIRHVGQAT ARELAGAYPY
FASLHEAGEQ ELAEVPDIGP VVARSIIDFF SKPWVQAMLD KLEQAGLPMR AGKEKEQVNN
NFEGQSVIFT GGLERHVRQE AEEMVRERGG RIVSSVSKKT SLVVAGKEAG SKLERALKLG
VRVIGEDEFE AML
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