Gene Clim_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1995 
Symbol 
ID6355499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2214874 
End bp2215833 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content56% 
IMG OID642669593 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_001944006 
Protein GI189347477 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCG TCGTCACCGA CTCACCTGAA GAAGCCGCCC GCTGCCTGAA TGAGGGCGGG 
GTTGTGGCAT TTCCTACTGA AACCGTTTAT GGCCTCGGAG CCGCGATCTG TCACACTGAA
GCCATCGAGC GAATTTTCGC GGCAAAGGGA CGACCCGGTG ACAACCCGCT GATCGTGCAT
ATCGCAGATC CCGGCGATCT CATGAAGGTA GCTTCGCATG TCAGCAGCGA TGCCAAAAAG
CTTGTCCTGC ATTTTTTTCC GGGACCGCTG ACGCTCGTTC TGAAAAAAAA CAGTTCGGTG
CCTGACTCCG TAACAGCAGG TCTCGATACC GTTGGCGTTC GCTGTCCGTC AAACAGCGAT
GCTACGGCAT TTCTGAAACG CTGCCGATGT CCGGTAGCCG CACCCTCTGC AAACGTCTCC
GGACGTCCGA GTTCGACCAG TTGGGATGCC GTACTGCACG ATCTGGACGG AAAGATAGAC
TGCATTCTGA AGGGGGCGCC AAGCGACATC GGACTCGAAT CGACCATCGT CGATTGCTCG
GGAGAAACGC CCCTGCTCCT CAGAACCGGA GCTGTCACCA TAGAAAATCT CCGGGAGGTT
GTTCCTTCGA TCAGAACAGC AGACTCCCTG CGACAGCATG AGATACCGAA AAGTCCCGGA
CTGAAATACC CTCATTATGC CCCTGAAGCA AGGATTGTGC TTCTCGGCGC AGGAGAACGC
ATCGACGCTG ACAGCGAACA GCGCACCTCG GCTTATATCG GATTATCCCT TCCTGCGGCA
GAGCAGTTTG CTCTTGTAAA GCACTGCTGC AACATTGAAG AGTACGCCAG GGTATTATTC
GATTTTTTCC GGTTGTGCGA TTCCCGCAAG ATCAGCTTCA TTTATTGTGA ACTGCCTCCG
GCAGAAGGCC TCGGACGGGC TGTCGGCGAC CGGCTGAGCC GCGCAGCAGC CGGCCGCTGA
 
Protein sequence
MQTVVTDSPE EAARCLNEGG VVAFPTETVY GLGAAICHTE AIERIFAAKG RPGDNPLIVH 
IADPGDLMKV ASHVSSDAKK LVLHFFPGPL TLVLKKNSSV PDSVTAGLDT VGVRCPSNSD
ATAFLKRCRC PVAAPSANVS GRPSSTSWDA VLHDLDGKID CILKGAPSDI GLESTIVDCS
GETPLLLRTG AVTIENLREV VPSIRTADSL RQHEIPKSPG LKYPHYAPEA RIVLLGAGER
IDADSEQRTS AYIGLSLPAA EQFALVKHCC NIEEYARVLF DFFRLCDSRK ISFIYCELPP
AEGLGRAVGD RLSRAAAGR