Gene Clim_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1993 
Symbol 
ID6355497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2211994 
End bp2213553 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content51% 
IMG OID642669591 
ProductPpx/GppA phosphatase 
Protein accessionYP_001944004 
Protein GI189347475 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCGG ATGCTCTTCG GGTGGCGGCT GTTGATCTCG GAACCAACTC CTTTCATATG 
GTTATCATTG AAGAGTGCCG TGAGAAAGGG ATTGTGGAGA TAGACAGGGT GAAAGATATG
ATCTGTATCG GCAGAGGGAG CATTTCGACA AAGATGCTCG ACGAGAAAGC CATGCAATCG
GGTATTGTCG CGTTAAAGAA TTTTCTTGTC CTCGCTTCCC AGCACGGTGT CGCGAGGGAG
CATGTCATTG CTTTCGCCAC GAGTGCAATT CGTGAGGCAA AGAATCAGGA TGTGTTTATC
CGTCGCGTGA GAGAGGAAAC CGGCCTGAAA GTGAAAGTCA TCTCCGGAAG GGAGGAGGCC
GAATTTATTT ATTACGGCGT TCGGAATGCC GTAAACCTCG GGAGTTCGTG CGATCTGATT
TTTGACATCG GGGGCGGTTC GGTTGAATTC GTCATTGCCG ACTGTCATGG GGTTAAACTG
CTTGAGAGCC GTAAAATCGG AGTGGCAAGG ATGTTCGAGC GTTTTGTTCA GAACGATCCG
ATCTCGGAAC ATGAAATCAA GCTGCTCGAG CAGTTTTTTG CCGCCGAATT GGTCTCGGCT
GCTGAAAAAG CCGTCGAACT GGGAGTCAAA CGAGGGATCG CATCTTCAGG AACGGCAGAG
AATATCGCCC GAATGATCCA TTCTCTCCAG GGAGTTGAGA GTGACGTTTC GCTCAACAAC
AGCGTTTTTA CCCGCAGGGA GTTCAACCGG CTTTATCGGA TGGTGCTGCC GCTTCGTTCG
GCCGAACGGA GGAAGATGAC CGGCCTGGAT GAAAAAAGGG TCGATCTGAT TGTTCCTGGA
CTGATTCTTT TCGATACCAT ATTCAGGACT TTCGGTCTGG AAGAGATTGT GCTGTCGGAT
TCCGCGCTGA GGGAAGGGAT GGTGCTGCAC TACCTGAGGC AGCAATACGA TTCGGGACAA
AACAGCGGCG GTCTGGATAT CAGAAGGGAG AGTGTTTATG AACTCGGGTT CCGGTGCAAC
TGGAACAGGG ACCATTCGAG GCATGTTGCC ATGCTCTGTC TTCAGTTTTT CGATCAGCTT
CTCACTTTGC ACGGTCTTGA TCAACGGTAT CGTGAATTGC TCGAATATGC AGCTCTCCTG
CATAATATCG GTACGTTTGT TTCGATCTCT TCACATCACA AGCACAGTCA GTACATTATC
ATGAACGGTG ATCTGCGGGG TTTTTCTCCC TCCGAAAAGG AGATTATCGG TCATGTTGCC
CGGTATCACC GGAAATCGCC CCCTTCAGAA AAACATGCGC AGTACAGCCA GCTCAAACCG
AGAGACCGGA ACGCCGTTGA TGTGCTTTCC GGAATTCTGC GGATCGCAAA CGGGCTCGAG
CGCGGTCACC GCCAGAATAT ACGGGAACTG CGGCTTGCCT GTAACCCGGA AATGATCACC
ATAGGCCTCC TGAGCCATCA TGAGCCGGAT ATCGAGATAT GGGCGGCCGA GCTTCTGAAG
TCGTGGCTTG AAACCGTTCT GCACCGTACA ATCGTGTTCG AGCCGCTTCA TGGTGCGTAG
 
Protein sequence
MTSDALRVAA VDLGTNSFHM VIIEECREKG IVEIDRVKDM ICIGRGSIST KMLDEKAMQS 
GIVALKNFLV LASQHGVARE HVIAFATSAI REAKNQDVFI RRVREETGLK VKVISGREEA
EFIYYGVRNA VNLGSSCDLI FDIGGGSVEF VIADCHGVKL LESRKIGVAR MFERFVQNDP
ISEHEIKLLE QFFAAELVSA AEKAVELGVK RGIASSGTAE NIARMIHSLQ GVESDVSLNN
SVFTRREFNR LYRMVLPLRS AERRKMTGLD EKRVDLIVPG LILFDTIFRT FGLEEIVLSD
SALREGMVLH YLRQQYDSGQ NSGGLDIRRE SVYELGFRCN WNRDHSRHVA MLCLQFFDQL
LTLHGLDQRY RELLEYAALL HNIGTFVSIS SHHKHSQYII MNGDLRGFSP SEKEIIGHVA
RYHRKSPPSE KHAQYSQLKP RDRNAVDVLS GILRIANGLE RGHRQNIREL RLACNPEMIT
IGLLSHHEPD IEIWAAELLK SWLETVLHRT IVFEPLHGA