Gene Clim_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1962 
Symbol 
ID6355017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2176611 
End bp2177144 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content52% 
IMG OID642669560 
Producthypothetical protein 
Protein accessionYP_001943973 
Protein GI189347444 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0548542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGAA TCAAGGCTAA GAGAGTCGGT TTCCGGATCG ATATGACGCC GATGGTGGAT 
GTGGCATTTC TTCTGCTCAC TTTTTTCATG CTTACCACCA AGTTTCGTCC ACCTGAAGTG
GTTCAGATCG ATCTGCCCTC TTCCCACTCG GAGCTTAAGC TCCCTGAATC CGATGTGCTT
ACGGTAACGG TAAGCGGAGA CAATACGTTT TTGATGGGGG TTTCCTCGCA GCAGTCACGG
GAAAAGATTT TCAATTCGGT AGTAAAGCCC AAGCTGCAGG CTGCGGGTCT TTCGCCGGCC
GCGGTCAGTG ATTCACTTGG AAGTTTCAGG CTTACCGAGA GTTTCAGGGT CGGCAGGGAA
GAACTCGATA AATTTGTCGT CATGGCGCGG TTTGCCGATC AGAAGCTCCG TCCGGTGGTT
CGCGCGGACG CTGACGCCGA TTATGAGGCA GTCGACCATG TCATAAAGGT CTACAAGAAA
GCCAACCTTC TGACCTTCAA TCTTGTAACC ATGCTGGAAA GGGAGGTACG CTGA
 
Protein sequence
MSRIKAKRVG FRIDMTPMVD VAFLLLTFFM LTTKFRPPEV VQIDLPSSHS ELKLPESDVL 
TVTVSGDNTF LMGVSSQQSR EKIFNSVVKP KLQAAGLSPA AVSDSLGSFR LTESFRVGRE
ELDKFVVMAR FADQKLRPVV RADADADYEA VDHVIKVYKK ANLLTFNLVT MLEREVR