Gene Clim_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1950 
Symbol 
ID6355005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2167110 
End bp2167427 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content53% 
IMG OID642669548 
Productsmall multidrug resistance protein 
Protein accessionYP_001943961 
Protein GI189347432 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.498297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTGGT TTGCACTCGT TGTCGCCGGC AGCCTCGAAT GTGTCTGGGC TGTCGGCCTG 
AAATACACCG AAGGGTTTTC GAAACCGATT CCCTCACTGA TTACGCTTAT AGCCATGATC
TGCAGTTTCT GGCTGCTTTC CTTTGCCATG AAAACCATAC CGGCAGGAAC CGCCTATGCT
GTCTGGACAG GTATAGGTGC TGCGGGAGTA GCTGTTGCCG GAATCATGCT TTTTGACGAA
TCCCGCGATA CGGCCCGTCT CATCTGCCTG CTGCTTATTG TAGCCGGAGT TGCCGGATTG
AGACTGTTTT CTCGATGA
 
Protein sequence
MDWFALVVAG SLECVWAVGL KYTEGFSKPI PSLITLIAMI CSFWLLSFAM KTIPAGTAYA 
VWTGIGAAGV AVAGIMLFDE SRDTARLICL LLIVAGVAGL RLFSR