| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1949 |
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| Symbol | |
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| ID | 6355004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2162622 |
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| End bp | 2166815 |
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| Gene Length | 4194 bp |
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| Protein Length | 1397 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642669547 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001943960 |
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| Protein GI | 189347431 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.539898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTAA TGAAAAAAAA CGTCTCAGGC GGCATTATTG CTGTTATTCT ACTGCTGTCA
ATCCTGTTGC TCAGCGGGTG GGCGATCTAT GTTGCAGATC GGCAGCTTCG TGCCGGACTC
CTTGCCGAAA TGATGATGAT GCGGCAGGAA ATCGGCCATG TTGAGCTTCA GGCATTGACC
GGTACCGCAG CAGATCTTGA CAAATCAGGT TATCAGGAGC TGAAAGGCCT TCTTTCGTCC
GTCTGCAGGG TCAGGACAAA ATGTCGTTTT GTTTATCTCA TCGGCATGAA GCCTGAAGGT
ACTCTGTTTT TTTATGCGGA TTCCGAGCCG GAAGGATCGC CGGATATTTC TCCAGCCGGA
CAGATTTATC AGGAAGCCTC CGGCCGGCTG CGCAATGTCT TTACTTCCGG AAAGGCAGAC
GTCGAAGGTC CGCTGCCTGA CCGCTGGGGC ATATGGGTAA GCGGTTTTCT GCCTGTTATC
GATAACCGAA GCGGCAAAAT CGTCGCTGTG CTCGGAATGG ACATAGAAGC AGCGGACTGG
GCCTGGGATA TCGCTTCCCG TTCAGCCCTT CCTATAGGCG GCATCGTTGT GATAAGCATT
GTTGTCGCCA GTTTTCTGTT CTCTTCACTC CGCTCTGACG ATACCCTGTC GAGTCCCGTT
CTCGAAAAGC TGTTTCCTTT TCTCGTTATT GTCTTCATTG TTCTTGCCAC AGGATTCGCA
TCGCTTCTTT TCTGGATGCA GGACAGACGC CTTGAAGATG TTATTCGCCA GACGGAAGCC
GAGGTGCTGA TGCAGTTCAG AACTTCATTA TTCGTTCAGT CCGATGGGCT TGAAATCGCC
CTGAATGTCA TTGAAAGCGA TTCATTGATT GCCGATGCTC TGCTTGAACG GCAGAGGGAG
ACGCTATACC GGAAATATCT TCCTCTGTTC GATCATCTTC AGAAAGACCA CGGCGTCTCC
TATTTCTGTT TTTCAGATTC CTCCCGGCGA TGCCTGCTGC GTATGCATGA CATTGAAAAA
CGCAATGAGC TTAATAGCCG TTTTACCATT CTGCAGGCAC AGAAAACAAG AAAAATAGCC
ACAGGAATCG AACTCGATCC TGATGGCATG CTGACCTTGC GGGTTGTGAT GCCGGTTATT
CATGACGGCG TTATTGCCGG GTACGTCGAT ATCGCCAAAG AGATCAAGGA TGTCGCTGAT
CATATTCACT TCACCCAGGG TCTTGCCATG GCCTTTTTTC TTGACAAGCC GCTTCTCAAA
AGAACCGCCT GGGAATCGGC AATGCAGAAA CTCGGCCGCG AAAGCGACTG GAATCGCTTC
GCCGACAACG TTCTCGTATT TACGACACTT CCCCGTTTTC CCGAAGCCTT TGACTCCTGT
CTGTCGCAAA GCCGGGGAAG GAGTTTTTTA CAGACTGCGG ATGTCGAATG GAACGGAAAA
TCATGGAGAG TGGCCGCGCT GCCTTTTGAA GACGTATCGG GAAGACTTAT CGGCAGGATT
CTCGTGCTTC AGGATGTATC CGCATTTAAA GCGGTTCTGT TCAGAATTAT CTCTTTTTCG
GGAGGATCCC TCGTTGTCAT ACTCGCGCTG TTTTTCGGCC TGCTTTATAA TCTTCTCAAG
CGTATCGATC GCGGCGTGAT AAATCGTGAG AGGGAACTGA TCGAGAGCAG AGAGCGGTAC
ATGCTTGCCG TAAACGGCAG TAACGACGGA ATCTGGGACT GGAACCTCAA AAGCAACGCT
CTTTTTCTTT CCCCGAAATG GAAAATGATG ATCGGTTATT ACGACGATAC GGTATCTCCC
GATACCTATG ATGCATTCGA AGATCGTCTT CATCCGGATG ATAAAGAGCC GTACAGGCGG
CATCTGCAGC AATATCTCAA AGGAGAATTG CCGGTATTCA GCACCGAGTT CAGGTTTCTG
CACCGGAACG GTTCTTATAT GTGGATTCTC GGCAAGGGAG AGGCGTTGCG TGATAAACAG
GGGATGCCAT ACAGAATGGC CGGTTCCTTC AGCGATATTA CCAGCCGTAA AAAAGCCGGG
GAGGAGCTCA TGCACAGGTC GGCATTTCAG CTGGTGCTCA TGGAGCTTGC CATAGGATTT
GTCAATAAAC CGCTTGAAGA GCTTGACAGC TCGATAAATC GGGCTCTTGC CCTGGTTGGA
GCGTTTTTGA ACGTCGACAG AACATATCTG TTCCGTTACG ATTTTGAAAA AGAGACGATG
AGCAATACGC ACGAATGGTG CAGTGAGGGA ATCAGTGCTG AAAAAGACAA CCTTCAGAAT
ATTCCGAATT CGTCGCTTCC CGACTGGGTG TTCACTCATC TCAAAGGCAG AATTATTCAC
ATTCCGAATG TTCAGGAGCT GCCTGAGGAC AGTTCTCTGA AATCGATTCT TGAACTGCAG
GGAATTCAGT CTCTCATATC GCTCCCTCTC GTTTACGGAG AGCAGTGTTT CGGTTTTGCC
GGCTTTGATG CAGTAAGGGA GAAGAAGAAC TGGGGCGATG AAGAGATCTC GCTTCTGCGT
GTTCTGACGG AATTATTCAC GAATGCGGAG CTTCGCTATC GGCACGAAAC CGCGCTGCTC
GATGCGCGTC TTGCGGCTGA AGCCGCCAAT CGGGCGAAAA GCGAGTTTCT TGCAAATATG
AGTCATGAAA TCCGTACGCC GATGAATGGT GTTATCGGTA TGACCCGTCT GCTGCTCAAT
ACATCGCTCG CTGAAGAACA GCGGAGTTTC GCTCAGACAG CGCTTGCAAG CGGAGAATCG
CTCTTGACTG TTATCAACGA TATTCTCGAT TTTTCCAAAA TAGAAGCCGG AAAACTCGAA
CTTGAAGAAA TCTCTTTTGA TTTACGCTTG CTCCTCGATG ATTTTGCTGC GATTATGGCG
GTAAAAGCGG GCGATAAAGG TCTTGAATTC ATTTGTGCGG CTCTGCCGGA TGTGCCCGTT
CGCTTCATAG GCGATCCTGA CAGAATCCGG CAGATTTTGA CGAATCTTGC GGGCAATGCG
GTTAAATTTA CGCATAAAGG GGAGGTTGCG GTCTATGTAT CGTTACTTCG TGAAACAGAT
GAAGAGGTCC TCGTCCGTTT TTCAGTTAAA GATACCGGAA TTGGAATTCC CCGGGAAAAG
CTCGACCGGT TATTCAGAAG CTTTACTCAG GTTGACGCTT CAATGACCCG TAAATATGGG
GGTACCGGAT TGGGGCTTGC CATCAGCCGT CAGCTTGTTG AACTCATGTC GGGAGAGATA
GGAGTGAACA GCCAGTCCGG CATCGGTTCG GAGTTCTGGT TTACGCTTTC CCTCAAAAAA
AATATTTTCC CTTCTGAAAA CGGACAGTAT CCGCTGGACT CGATTACCGG TACCCGACTT
CTTGTGGTCG ATGATAACGC TGAAAACCGC AACATGCTTC GGATGCTGCT GACCTCCTGG
GGTGTCAGGG TCTCGGAAGT CTCCTGCGCA TCAACGGCCA TCGAGCGGCT TCGTCAGGCT
GCCGAAGAAG GTGATCCTTT CAGGATAGCC ATTATCGATA TGGAGATGCC TGAAATCGAC
GGGTTGATGC TCGGGCGTTC AATAAAAGAT GAAACGGCTT TGGCGGATAC GGCACTGCTT
ATGATGAACT CGATAGGACG CCGGCCTGAT AACGAAAAGC TTCGTCGGTC GGGTTTTTTC
TCATTTCTCG TTAAACCGGT ACGACAGTCT GAATTATACA ATACCGTTTC TGAAGTTCTC
TTTTCCCGCG ACATCGATCC CTGCAATGCG GAGTCATTGC AGGAAAAGCT TGCCGCCGGC
AGTGTAACGT TGTCTGAGGC AGTCGATTCG GAAAAAAACG ACAGCCCGGT TCGAATCCTG
CTCGCAGAAG ACAGCGCGGT CAATCAATTG GTCGTCACAG GTATTCTCAG CAAGCTCGGT
TATGTCGTAG ATCCCGTATT CAATGGTCAG GAGGCGCTTG CCCGTCTTCG TGAATTTGCC
TATGACCTTG TCATAATGGA CATCCAGATG CCTGAAATGG ATGGGCTGGA AGCCACAAGG
ATAATAAGGG ATCAGGCTTC GGCAGTGCTG CGGCATGATG TTCCGGTTAT TGCCCTTACC
GCACATGCCA TGCATGGCGA CCGGGAGATC TGTCTCCAGT CGGGAATGAA CGACTATGTC
TCCAAACCCA TTGACCCGCC TGCTCTTATC GGGGTGATAA AAAAATGGCT GTGA
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| Protein sequence | MGLMKKNVSG GIIAVILLLS ILLLSGWAIY VADRQLRAGL LAEMMMMRQE IGHVELQALT
GTAADLDKSG YQELKGLLSS VCRVRTKCRF VYLIGMKPEG TLFFYADSEP EGSPDISPAG
QIYQEASGRL RNVFTSGKAD VEGPLPDRWG IWVSGFLPVI DNRSGKIVAV LGMDIEAADW
AWDIASRSAL PIGGIVVISI VVASFLFSSL RSDDTLSSPV LEKLFPFLVI VFIVLATGFA
SLLFWMQDRR LEDVIRQTEA EVLMQFRTSL FVQSDGLEIA LNVIESDSLI ADALLERQRE
TLYRKYLPLF DHLQKDHGVS YFCFSDSSRR CLLRMHDIEK RNELNSRFTI LQAQKTRKIA
TGIELDPDGM LTLRVVMPVI HDGVIAGYVD IAKEIKDVAD HIHFTQGLAM AFFLDKPLLK
RTAWESAMQK LGRESDWNRF ADNVLVFTTL PRFPEAFDSC LSQSRGRSFL QTADVEWNGK
SWRVAALPFE DVSGRLIGRI LVLQDVSAFK AVLFRIISFS GGSLVVILAL FFGLLYNLLK
RIDRGVINRE RELIESRERY MLAVNGSNDG IWDWNLKSNA LFLSPKWKMM IGYYDDTVSP
DTYDAFEDRL HPDDKEPYRR HLQQYLKGEL PVFSTEFRFL HRNGSYMWIL GKGEALRDKQ
GMPYRMAGSF SDITSRKKAG EELMHRSAFQ LVLMELAIGF VNKPLEELDS SINRALALVG
AFLNVDRTYL FRYDFEKETM SNTHEWCSEG ISAEKDNLQN IPNSSLPDWV FTHLKGRIIH
IPNVQELPED SSLKSILELQ GIQSLISLPL VYGEQCFGFA GFDAVREKKN WGDEEISLLR
VLTELFTNAE LRYRHETALL DARLAAEAAN RAKSEFLANM SHEIRTPMNG VIGMTRLLLN
TSLAEEQRSF AQTALASGES LLTVINDILD FSKIEAGKLE LEEISFDLRL LLDDFAAIMA
VKAGDKGLEF ICAALPDVPV RFIGDPDRIR QILTNLAGNA VKFTHKGEVA VYVSLLRETD
EEVLVRFSVK DTGIGIPREK LDRLFRSFTQ VDASMTRKYG GTGLGLAISR QLVELMSGEI
GVNSQSGIGS EFWFTLSLKK NIFPSENGQY PLDSITGTRL LVVDDNAENR NMLRMLLTSW
GVRVSEVSCA STAIERLRQA AEEGDPFRIA IIDMEMPEID GLMLGRSIKD ETALADTALL
MMNSIGRRPD NEKLRRSGFF SFLVKPVRQS ELYNTVSEVL FSRDIDPCNA ESLQEKLAAG
SVTLSEAVDS EKNDSPVRIL LAEDSAVNQL VVTGILSKLG YVVDPVFNGQ EALARLREFA
YDLVIMDIQM PEMDGLEATR IIRDQASAVL RHDVPVIALT AHAMHGDREI CLQSGMNDYV
SKPIDPPALI GVIKKWL
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