Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1946 |
Symbol | |
ID | 6355001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2158567 |
End bp | 2159862 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642669544 |
Product | outer membrane efflux protein |
Protein accession | YP_001943957 |
Protein GI | 189347428 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAGAA TGCTTCTTGC TTGCAGGGTC GGTATCTGTT CGTTGTTGAC GCTGCTTTTT TTCTCTGTTC CGAGGCCTCT CCAGGCGGTC GAGCTGCTGA CCTGGCAGCA GTGCGTCAGC GAAGCCGGAA AAGCCCATCC CGATCTCTAT TCGGCTCTGG CCGCAATGCA GCAGGCCGAA GCCGACAGCC GCATCACCGG TGGACAGCTT CTTCCACAGT TGAGTGCTGG TTTGACGGCC GTGCAGAACG GCACTACCGA ACAAAACATC GGTTCCTCAT CGGCATTTTC CTGGTCGCTG AGTGCAAGGC AGCTGCTCTA TGACGGTCGG AAAACCTCCC GACAGGTTGC TGCGTACAAA GAGGCTGAGA AAGCGGCGGG CCACAATTAC AGTGCGGTTT CTGCCGATGT GCGATTCGCC CTCCGTTCGG CATTTACCGA TCTTCTCAAA GCCGAGGAAC TGGTTGCTCT TTCAAAGGAG ATTGCCGAAC GCAGAAGGAA GAATTTCCGG CTCATCGGTC TTCGCTATCA GGCCGGAAGA GAACATATCG GTTCGCTCCG CAAGGCCGAG GCCGATCTCG GCGAGTCGGA GTTTGAAGTC TCACGGGCCG AAAGGGGGCT TGTGCTTGCA CAGTCCATAC TCGCTTCGGC TCTCGGGCGC GATCTGCGCA GTCCGATCAG GGTAAAGGGC TCGTTCACCG TCGAAGATGT TCTCACGGTA AAGCCGAATC TTGCCCTGCT TGCCAGAGAA AGTCCGCTGG TACAGCAGCT CGAAGCCAGG CGAAAAGCCG CCCGTTACGA TCTCGAAGCC GCAAAAGGGG CATTCTCTCC CGAACTATCC CTGACCTCTT CTATCGGCAG AAATTCCTTT GACAGCCTGC CTCCCGACGA GGTCGACTGG AATGCCGGAA TCGAGCTGTC TTTGCCGATA TACGGCGGCG GCACGGGCCG TGCCAAAGTC GCGCGGGCCA TGGCGGTTGT CAGTCAGCAG AATGCCGAAG AGAAAAGCGG CTACCTTCAG GTGTTCGATA TGCTGGAAGA GAGCTGGAAG AATTTTCTGG ATGCCCGTCA GTACGTTACC GTGCGGAGAA AATTTCTCGA TGCGGCCGTT GAACGCGCAG CTATTGCCAA TGTCCAGTAT TCGAACGGTC TTATCTCTTT CGACGACTGG GTGATAATAG AAGACAATCT TGTGAGCGCA AAAAAGGAGT TTCTCAATGC CGGAGCAGAT CTCTTGATTG CCGAGGCTCA ATGGATCAAG GCAAAAGGGG GAGGACTTGA TGATCAGCAG AAGTAA
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Protein sequence | MYRMLLACRV GICSLLTLLF FSVPRPLQAV ELLTWQQCVS EAGKAHPDLY SALAAMQQAE ADSRITGGQL LPQLSAGLTA VQNGTTEQNI GSSSAFSWSL SARQLLYDGR KTSRQVAAYK EAEKAAGHNY SAVSADVRFA LRSAFTDLLK AEELVALSKE IAERRRKNFR LIGLRYQAGR EHIGSLRKAE ADLGESEFEV SRAERGLVLA QSILASALGR DLRSPIRVKG SFTVEDVLTV KPNLALLARE SPLVQQLEAR RKAARYDLEA AKGAFSPELS LTSSIGRNSF DSLPPDEVDW NAGIELSLPI YGGGTGRAKV ARAMAVVSQQ NAEEKSGYLQ VFDMLEESWK NFLDARQYVT VRRKFLDAAV ERAAIANVQY SNGLISFDDW VIIEDNLVSA KKEFLNAGAD LLIAEAQWIK AKGGGLDDQQ K
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