| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1944 |
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| Symbol | |
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| ID | 6354999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2155645 |
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| End bp | 2157618 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642669542 |
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| Product | ABC transporter related |
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| Protein accession | YP_001943955 |
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| Protein GI | 189347426 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.819386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACCTA TCCTTGAACT TCGCGATGTC CACCGGACAT ACCGAATAGG CGAAAGCACG
GTCCATGCCC TGAGAGGCGT GTCGCTTACC GTTGAACAGG GGGAGTTCAT AGCGATCATG
GGCGCATCGG GATCAGGGAA ATCATCGCTG CTTCATATTC TCGGTCTGCT TGACAACCCC
GACAAGGGAG AATACCGGAT TCTCGGCAAT AACGTCAATA CGCTCTCCGG GGACGAACAG
GCCGGTTTGC GCAACAATGT TGCCGGCTTT GTCTTTCAGC AGTTTCATCT GCTCCGGCGA
ATGACCATCG TGGACAATGT CCGGCTGCCG CATATCTACA GCGGTCTCAA AGGAGATTTC
CGCCAGGAGG CGGCCAGGCG CCTTGCACTT GTAGGGCTTG AAAAAAGGAT CGATCACACG
CCGAACCAGC TTTCCGGAGG CGAACAGCAG CGGGTTGCCA TAGCCAGGGC TCTTGTTCGC
GATCCGCTGC TCATTTTTGC AGACGAACCG ACGGGAAACC TCGATACGAA AAATTCGTAC
GAGATCATGA AAATACTCAA AGGGCTTCAT GAGCAGGGTA AAACCATCAT CATGGTTACC
CACGAGACCG ACATCGCCGC CTATGCCGAA AGGGTGATTA CCATGCGTGA CGGGACTATT
GTCACCGACG AACGCAGAGA AAGCCCTGAA CGCAAGTCCA TTCCTGTCGA AACTGCCCGT
TTCGACCTGC ATGCAGGCGG CAGGCGGACC CTGCTGCAAT CCGGGCGTTT TTCCGTGTTC
ATGGCGCAGG CGTTTCAGTC GATTCTCTCC AACAAGGTAC GCTCACTTCT TTCGGTTCTC
GGCATTCTTG TCGGTGTCGC CTCGGTGATC GCCATGATGG CGCTCGGCGA AGGAGCCAAA
GCCGCCATGC AGCAACAGCT CAAATCCATG GGCTCGAACC TCCTCTCCGT AAGGGGAGGG
TCGGCGAAAA TTCGGGGCGC TGCAAGCGGG GCAGGCGCGG TTACCCGGTT TACGGTCAAA
GATGTCGAGG CGATCGCATC TCTCGGGTCA CTGGTAAAAA ATGCTACAGG AGTGGTAAGC
GGAAGCGCTC AGACTGTTTT TGAAAACAAA AATTGGAACA CCAACCTTGA AGGGGCTGGC
TATGATTACG GGGTCATGCG TTCAACCATA CCGACAATCG GGCGGTGGTT CAGCAGGGAG
GAAATGCAGA AGCGCGAAAA GGTTGCCATT ATAGGTGTAA CGGTCGCCAA AGAGCTTTTC
GGAACCGGAA ACCCGATCGG ACGGACCATC AAAATCAACA GAATTAATTT CAAGGTTATC
GGGATCGCTC CGGTAAAGGG TTTTTCCGGT CCCCGGGACG AAGACGATAT CGTCATCATT
CCCCTCACGA CCGCCATGTA CCGGGTACTT GGCAAGGATT ATCTCAGCGG CATCTTTGTT
GAAGCAAGGC AGTCTTCAGG CATTGAGCGG ACGAAAAACA CAATCAGCGA GTTGATCCGC
AAGCGTCACC GGTTGCATTC CGACGACGAC TCCTTCAACA TTCGCGATAT GACCGAAATT
CAGAAGATGC TCACCAGTAC CACTGAGACC ATGAGCATGC TGCTCGGTTC GATTGCGGCA
ATATCGCTTC TGGTCGGAGG CATCGGCATC ATGAACATCA TGCTGGTTTC GGTAACCGAA
CGCACCCGTG AAATCGGTCT CAGAAAAGCC ATCGGTGCAA GAAAAAACGA TATTATGCTG
CAGTTTCTCG TGGAGTCCGT CGGCCTGACC ATCAGTGGAG GAGTTATAGG CATCATGATC
GGTATCGGAG TGTCACTGCT TTTATCGTTA TTTGCCGGAT GGGCAGTGAA AACCTCGATT
TTCTCTGTCG TGCTCGCTAC GGTATTTTCT GTCATTACCG GTCTTTTTTT TGGTCTCTGG
CCGGCCAGGA AAGCGGCGGA ACTCAATCCG GTTGAAGCCT TGCGCTACGA ATAG
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| Protein sequence | MRPILELRDV HRTYRIGEST VHALRGVSLT VEQGEFIAIM GASGSGKSSL LHILGLLDNP
DKGEYRILGN NVNTLSGDEQ AGLRNNVAGF VFQQFHLLRR MTIVDNVRLP HIYSGLKGDF
RQEAARRLAL VGLEKRIDHT PNQLSGGEQQ RVAIARALVR DPLLIFADEP TGNLDTKNSY
EIMKILKGLH EQGKTIIMVT HETDIAAYAE RVITMRDGTI VTDERRESPE RKSIPVETAR
FDLHAGGRRT LLQSGRFSVF MAQAFQSILS NKVRSLLSVL GILVGVASVI AMMALGEGAK
AAMQQQLKSM GSNLLSVRGG SAKIRGAASG AGAVTRFTVK DVEAIASLGS LVKNATGVVS
GSAQTVFENK NWNTNLEGAG YDYGVMRSTI PTIGRWFSRE EMQKREKVAI IGVTVAKELF
GTGNPIGRTI KINRINFKVI GIAPVKGFSG PRDEDDIVII PLTTAMYRVL GKDYLSGIFV
EARQSSGIER TKNTISELIR KRHRLHSDDD SFNIRDMTEI QKMLTSTTET MSMLLGSIAA
ISLLVGGIGI MNIMLVSVTE RTREIGLRKA IGARKNDIML QFLVESVGLT ISGGVIGIMI
GIGVSLLLSL FAGWAVKTSI FSVVLATVFS VITGLFFGLW PARKAAELNP VEALRYE
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