| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1936 |
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| Symbol | gltD |
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| ID | 6354991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2142680 |
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| End bp | 2144155 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642669534 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001943947 |
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| Protein GI | 189347418 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAAG TAAAAGGATT TATGGAGTTC CGGAGAGCCC TTCCATCCGA CAGGGCCCCT
CTGGAGAGGA TAAAGGACTG GAAGGAGTTC CACGACGAGA TGCCCGAGGG TGAACTGCAG
AAGCAGGGCG CCAGATGTAT GGATTGCGGA ACCCCGTACT GCCATACCGG CTTTCTTCTC
AGCGGCATGG CCAGCGGCTG TCCGATTCAT AACCTCATTC CCGAGTGGAA CGACTACATC
TACAAAGGGT TCTGGCACGA AGCATACGAC AGGCTCATGA AAACCAACAA CTTTCCGGAA
TTTACCGGAA GAGTCTGTCC CGCTCCATGC GAGGGATCAT GCGTGCTTGG CATTATCGAA
CCCGCAGTTA CCATCAAGAA CATCGAGTGC TCGATTATCG AGCACGCCTT CGCCGAAGGA
TGGGTAACCC CCAAGGCAAT AGCCGCCCGT ACCGGAAAAA GGGTAGCTGT TATCGGTTCA
GGACCTGCAG GACTCGCCTG TGCCGACCAG CTCAACAAGG CCGGTCACAG CGTAACCGTA
TTCGAGCGTG ACGATCGTGT CGGCGGTCTT ATGATGTACG GCATTCCCAA CATGAAGCTC
GATAAAAAAA CGGTAATTGA GCGCAGAATC GATATCATGA AAGCTGAAGG CATCACCTTC
ATGACCTCCA CCGAAGTCGG TACCGACTAC CCAGCCGAAA AACTTTTCGA AGAGTTCGAC
GCGGCGGTGC TCTGTACCGG AGCCACAAAG CCAAGGGATC TGACCGTTGA AGGCCGTAAT
AACTCCGGGG TGCACTTTGC CATGGACTTT CTCCGCTCCA GCACTAAAGC CCTTCTTGAC
GGCACTGAAC CGGTACTCTC GGCAGCAGGA AAAGAGGTCA TCGTCATCGG TGGCGGCGAT
ACCGGCACAG ACTGCGTAGC CACGTCGCTT CGTCAGGGAT GCAAAAGCGT CATCCAGCTT
GAAATCATGC CGAAACCCTC TCTTGAACGA CAGCTCGACA ACCCGTGGCC TGAATGGCCC
AAAATCTACA AGGTGGATTA CGGTCAGGAA GAAGCTGCCG AAGTGCAGGG CAGCGATCCC
CGCCGTTACT GTATGATGAC CAAGAAATTT CTCGATTCCG GCACCGGTGC TGTCGTCTCC
GTCGAGGTTT CACAGGTCGA ATGGGTCATG GATGAAGGCC GTTTCGTTCC CCGTCCGGTT
TCAGGAACCG AAGAGATTCT GCCGGCTCAG CTTGTTCTGC TTGCCATGGG TTTTGTCGGA
CCGGAGGAAA GCCTGCTCCA GCAGCTTCAG GTCATCCAGG ATGCTCGTGG CAACATCAAA
GCAGACGAAA AAACATGCAA GACCAACAAA CAGGGCATTT TTGCCGCCGG CGACGCCCGG
CGCGGACAGA GCCTTGTCGT ATGGGCAATC AACGAAGGCC GTGCGGCAGC CCGTGAATGT
GACCGCTATC TGATGGGTGC GACCTTTCTG CCCTAA
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| Protein sequence | MGKVKGFMEF RRALPSDRAP LERIKDWKEF HDEMPEGELQ KQGARCMDCG TPYCHTGFLL
SGMASGCPIH NLIPEWNDYI YKGFWHEAYD RLMKTNNFPE FTGRVCPAPC EGSCVLGIIE
PAVTIKNIEC SIIEHAFAEG WVTPKAIAAR TGKRVAVIGS GPAGLACADQ LNKAGHSVTV
FERDDRVGGL MMYGIPNMKL DKKTVIERRI DIMKAEGITF MTSTEVGTDY PAEKLFEEFD
AAVLCTGATK PRDLTVEGRN NSGVHFAMDF LRSSTKALLD GTEPVLSAAG KEVIVIGGGD
TGTDCVATSL RQGCKSVIQL EIMPKPSLER QLDNPWPEWP KIYKVDYGQE EAAEVQGSDP
RRYCMMTKKF LDSGTGAVVS VEVSQVEWVM DEGRFVPRPV SGTEEILPAQ LVLLAMGFVG
PEESLLQQLQ VIQDARGNIK ADEKTCKTNK QGIFAAGDAR RGQSLVVWAI NEGRAAAREC
DRYLMGATFL P
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