Gene Clim_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1905 
Symbol 
ID6354959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2108454 
End bp2109653 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content56% 
IMG OID642669502 
Productglycosyl transferase family 4 
Protein accessionYP_001943916 
Protein GI189347387 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAACC CCCGATTCCT TCTGCCGATG CCGGTGTTTG CCGCAGCTTC GCTGCATGCG 
CAAACCGGAA CAGGCGGCAT AGCCGCCCGC GAAGCCCTGC TGCTGCCCTT CTCGAAGGTG
CCGCTTCTTG AATACAGCGG CATGTATCTG CTCTCCCTTG CGGTTTCGTT TGCCGCCATC
CTGCTGCTCA CGGCCAATGC CGAAAAGCTC GGGCTGATCG ACATGCCCGA CGGCGTACGT
AAAATCCATA CGGTCGCCAA GCCGCTGGTC GGCGGGCTCG GCATGGTCGC CGGCATTCTG
CTCTCCATGC TGGTTTTTCT GCCGATAGCG CACTATATCG GCCTGCTTTT TGCGATCCTC
ATGATCGCCA CCGTCGGCTT TTTCGACGAC CGTCACGACA TCAGCTTTAA AATCCGTTTT
GCCGTTCAGG CTCTTGCCAC GGTCTCGGTC ATGTACTTCG GCGGCACCGT TCTGCACTCC
TTCGGCAATC TGTTCGGTTT CGGTCCGGTT TTTACCGGAT CGTTTGCCGT TGCCGTAACG
ATATTCTGTG TGATCGGAGT CATCAACGCC ATGAACATGA TCGACGGTCT CGACGGTCTT
GCCGGTTCCA TATCGATGGT ATCGTTCAGC GCTTTCGGCA TTCTTGCCGG ACTCAACGGT
CAGACCGGCC TTGTTTTCAT CAGCGTGGCT TTCATCGGCG CGCTTGCCGC TTTTCTCCGC
TTCAACTGGT CGCCCTCGAA ACTGTTCATG GGCGATACCG GCAGCATGAC GCTTGGCTTC
GTGCTTGCCT GGTTCGCAAT CGAAACAACC CAGGGCAGCA GCACTGTTTC GCCATCAGCG
GCACTGCTGG TGCTTGCCCT GCCCGTCACC GATACCATTG TCGTCATGTT CAAGCGTATC
AGAAAAGGCA AAAGCCCCTT CTTTGCCGAC AAAACCCATT TCCACCACGT CCTCAAAGCC
ATGGGGCTCG ACCACCGCAA AGCCGTCATC ATCATGGCGA CAGCCTCAGC CATATCCTCT
TTCGTCGCAA TCATCGGCAC CATGCTCCGC CTGCCGGACT ACACGCTCTT CTCCATTTAC
CTTTTCTTCT TCATGGCCTA CTTCATAGCC TCATACCGCA TAAAAACAAT CTACCGTATC
GTAATCTGGC TGAGGCGCAT AACCGTATTC AATATAAAGC TCGACAAGGT GCTGAGGTAG
 
Protein sequence
MLNPRFLLPM PVFAAASLHA QTGTGGIAAR EALLLPFSKV PLLEYSGMYL LSLAVSFAAI 
LLLTANAEKL GLIDMPDGVR KIHTVAKPLV GGLGMVAGIL LSMLVFLPIA HYIGLLFAIL
MIATVGFFDD RHDISFKIRF AVQALATVSV MYFGGTVLHS FGNLFGFGPV FTGSFAVAVT
IFCVIGVINA MNMIDGLDGL AGSISMVSFS AFGILAGLNG QTGLVFISVA FIGALAAFLR
FNWSPSKLFM GDTGSMTLGF VLAWFAIETT QGSSTVSPSA ALLVLALPVT DTIVVMFKRI
RKGKSPFFAD KTHFHHVLKA MGLDHRKAVI IMATASAISS FVAIIGTMLR LPDYTLFSIY
LFFFMAYFIA SYRIKTIYRI VIWLRRITVF NIKLDKVLR