Gene Clim_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1870 
Symbol 
ID6355211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2056743 
End bp2057915 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content55% 
IMG OID642669471 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001943885 
Protein GI189347356 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000004805 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGGA AAACCATAAT CGGTCAAAAA CAGCAGATCC GTGTTCTGCA GAAAGCGCTT 
GAAACCGGAC GTCTCGCTCA TGCCTACCTC TTCACCGGCC CCGAAGCCTC CGGCAAAGAA
AGCGTAGCCT TCGAACTGGC CCGCACCCTC AACTGCCGGA ACAAAAACCG CGCCCCCGAA
ACCGGCTCCT GCGGAACCTG TCCCGACTGC ATGCAGATCG ACAGTTTCAT GCACGCAAAC
ATCGAATATA TCTTTCCTGT CGAAGCCGCC CTGCTCGACT CCGGCGAATC CGCAAAAAAA
GAGAACAAAA AATTCAGCGA AACAAAAGAG CGCTACGAAG CGCTCCTTGA AGAAAAAAAA
CTGAACCCAT ACCTCACGCC GGCCATGGAA CGCTCCATGG GCATTCTCAG CGAACAGATC
GTCACCCTGC AGCAAAAAGC CCTCTACAGG CCCTCCGAAG GCCAGAGAAA AATATTCATC
ATCTCACAGG CAGACCGTAT GAACCCTGCG GCGGCCAACA AAATTCTCAA ACTGCTCGAA
GAACCCCCAG CCCACATTCT TTTCATACTC ATCTCCTCGC GCCCCGAAGC CGTGCTGCCT
ACCATCCGTT CACGTTGTCA GATCGTTCGT TTTCAACGTC CCGGCCCAAT GGAACTCCGC
AAATGGATTC AGGAAAACCG CCCCGACATT CACGAACCCG AACTCGGATT CATCGTCAGC
TTCTCGCGCG GCAACCTCGC TCTTGCCTGG GATCTCATCA ACCAGGGAGG CGTCACCGGC
AACATACCCG TCATTCAGCT CCGCAACCAG GCCCTCGACT ATCTTCGTCT CGTACTCACG
CCCAGCCGTC TCCACGAAGC CCTCTCCGCC TGCGAAAGCC ATGCCAAAAA CCTCTCCAAA
ACCGAACTTC CGCTCTTTCT CGGCGCACTG CTGCTCTTCC TGCAGGACGT CAACCACCGC
CTGATCGACC CCGAATTTCA GACACTCAAC AACCCCGACA TAGCCGCATC GATCGACCGG
TTCGCCAAAA ACTTCCCCAC CCCCGACTTC CTCGCAATCT CCACCATAAC CGAAGAAGCC
ATCCGCGCCA TCGACCGAAA CGCCAACCCC CTCCTCGTCC TCGCTGCCTG GACATCAGAA
ATCAAAAATC TGATCCTCGC AAAATCACAA TAG
 
Protein sequence
MSWKTIIGQK QQIRVLQKAL ETGRLAHAYL FTGPEASGKE SVAFELARTL NCRNKNRAPE 
TGSCGTCPDC MQIDSFMHAN IEYIFPVEAA LLDSGESAKK ENKKFSETKE RYEALLEEKK
LNPYLTPAME RSMGILSEQI VTLQQKALYR PSEGQRKIFI ISQADRMNPA AANKILKLLE
EPPAHILFIL ISSRPEAVLP TIRSRCQIVR FQRPGPMELR KWIQENRPDI HEPELGFIVS
FSRGNLALAW DLINQGGVTG NIPVIQLRNQ ALDYLRLVLT PSRLHEALSA CESHAKNLSK
TELPLFLGAL LLFLQDVNHR LIDPEFQTLN NPDIAASIDR FAKNFPTPDF LAISTITEEA
IRAIDRNANP LLVLAAWTSE IKNLILAKSQ