Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1842 |
Symbol | |
ID | 6355183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 2019415 |
End bp | 2020554 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642669446 |
Product | polysaccharide export protein |
Protein accession | YP_001943860 |
Protein GI | 189347331 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.185865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTACT ACAGCAGCGC CACAGCCCGA AGAAAACACT CGACACGCAC TGCCCGTCCC CTGGTGATCA TCTGCGCCGC CATGCACCTG CTGCTCCTGG CCGCCTGCGG CAGCATATCT CCGAAAGAAA CCACACAATA CGCTCCTCCG GAAAAAGAAT TCAAGGCAGA CATTCCGAAA AAAACGCAGG AATTCGCCAA ACCCTCGACC ATAAGAGATC TCACCCCGAT CGAACAGTTC AGTTACCGGC TCGGCCCTGG AGACATCCTC AGCGTGCAGG TATGGAGAAG ACCGGAGCTT TCACAAGAAA ACATCATGGT CTCGCCCGAC GGCAACATCG CCATTCCGAG AATCGGCAAC ATGAACGTGC TCAACCGAAC ACCGGCCGAA ATACAAAAAC TTATCACCGC CCGGCTCGAA GTGCTCTACA TCAGGCCGGA AATAACCGTT CGAGTCCAGG AATTTCACAA CAATAAAGCT TTCGTCCTGG GACGAGTCAC CAAACCCGGC GTCGTGAACT TCCCCGGCAG AGGCACCCTG CTCGAAGCGC TCGCACTCGC CGGCGGACTA CCCTATCAGG GTAAAGAAAC CTTCCTCACC AAATGCGCCA TCATCCGGGG CAACGATATC GTCATATGGA TCGACCTGCA GGATCTCCTC AAAAACGGAA ATATGGCGCT CAACGCATCC ATCATGAACA ACGACGTCAT CTTCATTCCC GAAGCTGAAG ATGAAATGAT CTACGTCATG GGAGAGGTCA TCACCCCCGG TGCCATACAG CTGAAAAGCA GCATGAACGT ACTTAAAGCC ATCATGCTGG CCGGGGGCAT GAACAAGCAC GCAAACCCCG AAAAAATCTT CATCATCCGC CAGCAGGACC TCAAAGGAAA CGTCATCAGG GTAAACCTGA AAAATCTGCT CGAAAAGGGC GACTTCGCCA AAAACTATAC CCTTCTGCCT GAAGACATCG TCTTCGTCAG CCCGAGCGGC ATGGCAAAAT TCAACTACAC CCTCGAAAAA CTCATCCCGG CGCTGCAGGT GCTCAACCTC GGTATCGACA ACTTCGAATC ATTCGGCCTC ATGCAGGAAT TGCGCAGAAA GCTCTGGGGA CAGGAAGGTT TCGTCAATTC CAGCGAATGA
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Protein sequence | MQYYSSATAR RKHSTRTARP LVIICAAMHL LLLAACGSIS PKETTQYAPP EKEFKADIPK KTQEFAKPST IRDLTPIEQF SYRLGPGDIL SVQVWRRPEL SQENIMVSPD GNIAIPRIGN MNVLNRTPAE IQKLITARLE VLYIRPEITV RVQEFHNNKA FVLGRVTKPG VVNFPGRGTL LEALALAGGL PYQGKETFLT KCAIIRGNDI VIWIDLQDLL KNGNMALNAS IMNNDVIFIP EAEDEMIYVM GEVITPGAIQ LKSSMNVLKA IMLAGGMNKH ANPEKIFIIR QQDLKGNVIR VNLKNLLEKG DFAKNYTLLP EDIVFVSPSG MAKFNYTLEK LIPALQVLNL GIDNFESFGL MQELRRKLWG QEGFVNSSE
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