Gene Clim_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1840 
Symbol 
ID6355181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2017709 
End bp2018683 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content57% 
IMG OID642669444 
Productglycosyl transferase family 2 
Protein accessionYP_001943858 
Protein GI189347329 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.939946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACCA TCGTCATCGT CAGCTACAAC ACCAGGGAAA TCCTGCAGAA CTGCCTCGAA 
ACCCTCTACA GGGGAAGCGG CAGCACCGAC ATGGAAGTAT TCGTCGTCGA CAACGACTCC
CGCGACGACT CGGCCCGGAT GGTCCACGAA ACCTTCCCTC AGGTCCGCCT CATAGCCAAC
AGCTCAAACC TCGGCTTCGC AGCCGCCAAC AACCAGGCCT TCGCGCTCGC CGGAGGCCGC
TACATCATCC TGCTCAACCC CGACGCCTAC GTCGGCCCCA CATCCATCCA GAACGCCGTA
ACGTTTATGG ACCAAAACCC CCGATGCGGG CTCTGCGGAG GAAAAATCAT ATCACCAGAA
GGAAAGCTGG AACCCTCCGC CCGGCGCTTT CCCTCCCCGC TCTCCAAACT CCTCACCCTC
TCGGGCCTCA GTGGACGGTT CCCCGGCTCC CCCATACTCA ACAGGCACGA ATTCGGTGGA
TTCGCGCACG ACCGTCCCCT CGAAGTCGAC TGGGTACCCG GCACCTTCAC CATCATCCGA
AAAAAAATGC TCGAAGAGAT CGGAGAATTC GACGAACGCT TCTTCATCTA CTACGAAGAA
ACCGATCTCT GCCTCCGCGC GAAAAAAGCC GGATGGAAAA TATACTTCAT CCCCGACGCC
GAAGTCATGC ACATCGGCGG AGCCTGCAGC AAAACGAGAA AAGACAAAAC CTTCGACACA
GGAGCCTCGC AGGTACTCTC CTTCAGGATG CGCAGCGAAT GGCTCTACTA CCGCAAAAAT
TACGGAATCA TAGCCCTTGC CGGCAGTTCA GGTGCGGAAA TAGGCTGGTA CGCCCTGCGC
TATCTGAAAA ACCTGCTGAT CCTTTCGCCC GAAGCACCCC GGAAAAGAGC CGCAGCGGCA
TCGACCATCA GCCAGATACT ACGCTCCCTC AAAGAAACGA AACTCGGCAC ACTCTCGCCG
CAAACACCCT GGTAA
 
Protein sequence
MVTIVIVSYN TREILQNCLE TLYRGSGSTD MEVFVVDNDS RDDSARMVHE TFPQVRLIAN 
SSNLGFAAAN NQAFALAGGR YIILLNPDAY VGPTSIQNAV TFMDQNPRCG LCGGKIISPE
GKLEPSARRF PSPLSKLLTL SGLSGRFPGS PILNRHEFGG FAHDRPLEVD WVPGTFTIIR
KKMLEEIGEF DERFFIYYEE TDLCLRAKKA GWKIYFIPDA EVMHIGGACS KTRKDKTFDT
GASQVLSFRM RSEWLYYRKN YGIIALAGSS GAEIGWYALR YLKNLLILSP EAPRKRAAAA
STISQILRSL KETKLGTLSP QTPW