| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1832 |
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| Symbol | |
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| ID | 6355173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 2009347 |
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| End bp | 2010978 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642669436 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001943850 |
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| Protein GI | 189347321 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACC ATAAAGACCT CACCATACTT TTTGTCGATG ACGAACCCGA CATTCTCAGT
TCGCTGAACC GTTTTTTGAG AAGAGAACCA TACAAAAAGC TCTTTGCGGA AAACGGTAGA
AAAGCTCTCG AAATCTTTGA CTCGGTTACC GTCGATATTA TCATTTCCGA TCTGCGCATG
CCCGAAATGA ACGGACTCGA ACTGATCAAT GAAGTAAAAA AAAGAAGACC GGAGAGCGTC
CGGATGATTC TCAGCGGTTC GCAGGATATT GACCAGATCA TTGAATCCAT CAATACCGGA
GAGGTATTCC GCTTTATTCC CAAACCCGTA GAGCCCGGAG CATTCAAAAA AATCCTCAAC
GACGCTATTG ACTATTACTG CCTGAAAAAC GAACGGGAAG AGCTGTTCAA GGAGCTCTCC
ATAAAAAATC AGGAGCTCAC AAAAGCGAAC GACGCGCTGA AAATCCTCAC CGGAGAACTC
GAAAGAAGCG AAGAACAATT CCGTTCGATG AACGACGCGG CACATGATGC TGTCTTCATG
CTCAATCAGG AAGGCGCCAT CATTTACCGC AATGCAGCGG CCGAAACCAT TTTTGGTTTC
AACCGCAATC AGTATCCGAA TCAGCCGTTT GACGAGCTGC TTGCGAACGA AACGACGCAG
ATCGACCTGA AGCGGTTCTG CAAAAACCCT TCTGAAAAAA ATGCGGACAA AGTCATTCAG
ATCGAAGGTC TAAAAATAAA CGGAACGACC CTGCCGATTG AAATATCTAA AGGATGCGTC
CATATCGACT CCCTGCCGCA CACCGTAGTC ATAGCCCGCG ACATCACCTC CCGCGTTGAA
GAAGAACGCA GCCGACAGCG ATACACAAAT CTGCAGAGAG ATCTCGAGTC GCAGATTGAA
AAAAAACTCC TTCAGAGTCC GGTACCGGAG TCGCTCCAGG GAGCATCGCT AAGCCGACTC
ATGCTGCCAT CCGGTCATCT CGATGGTGAT TTCATCGACT TTATCGTCTA TGACCGCAGT
CACATAGACA TTCTCATCGG TGACGTCATG GGACACGGCA TTCAATCGGC GCTGGTTGGA
GCGGGAATAA AATCACTTTT TCTGAAAGTA CTTGCAGAAC AGCAATCCGA CACAGGAGAG
TTACCCTCCC TTCAGGATAT CCTGACTGCA GTTCATGATC GCTGCATCCA CGAACTGATC
GAACTCGGAA CCTACACGAC ACTGCTCTTC ATACGGCTGG ACCTGTCAAA CCGGAAATTC
TCGATCGTTG ACTGCGGACA CACCCCTGCC ATACACTTTC ACTCCCGAAC CGGAACCGTC
AGGCAGCTCA AAGGAGAAAA TCTTCCGATC GGCATGATAG AACAGCAGCA GTACTCCGAA
AGCACCTATC CCATTGAAGA AAACGATATC CTTGTCCTCT ATTCGGACGG AATAACGGAA
AGCCGCTCCC CCAACGCAAC CATGTTCGGC ATAGACCGGC TTGCAGAAAT CATAAAAAAG
CACCATGAAC TGCCTGCGGA CAATCTGGTC AGTACCATCA GAACATTGTT ATCGGACTTT
TCAGGCAGAG CAACCTTTGA CGACGACGTC ACCTGTCTGG TAATCAGGAT CGAACAGACC
AGCAGACGAT AA
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| Protein sequence | MKNHKDLTIL FVDDEPDILS SLNRFLRREP YKKLFAENGR KALEIFDSVT VDIIISDLRM
PEMNGLELIN EVKKRRPESV RMILSGSQDI DQIIESINTG EVFRFIPKPV EPGAFKKILN
DAIDYYCLKN EREELFKELS IKNQELTKAN DALKILTGEL ERSEEQFRSM NDAAHDAVFM
LNQEGAIIYR NAAAETIFGF NRNQYPNQPF DELLANETTQ IDLKRFCKNP SEKNADKVIQ
IEGLKINGTT LPIEISKGCV HIDSLPHTVV IARDITSRVE EERSRQRYTN LQRDLESQIE
KKLLQSPVPE SLQGASLSRL MLPSGHLDGD FIDFIVYDRS HIDILIGDVM GHGIQSALVG
AGIKSLFLKV LAEQQSDTGE LPSLQDILTA VHDRCIHELI ELGTYTTLLF IRLDLSNRKF
SIVDCGHTPA IHFHSRTGTV RQLKGENLPI GMIEQQQYSE STYPIEENDI LVLYSDGITE
SRSPNATMFG IDRLAEIIKK HHELPADNLV STIRTLLSDF SGRATFDDDV TCLVIRIEQT
SRR
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