Gene Clim_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1823 
Symbol 
ID6355163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1997774 
End bp1999057 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content55% 
IMG OID642669426 
Productseryl-tRNA synthetase 
Protein accessionYP_001943841 
Protein GI189347312 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATA TTACCTATAT CCGCCAGAAT CAGGACGACG TCACTGCCAT GCTCAGGAAC 
CGGTTGCTTG AAAGCGAAAT ACCAAGGGTT GCCGAGCTGC TCGGGCTTGA CAGGCAGCGC
CGGGAACTGG TACAGCAGGC CGACGATATG AAAGCCCTGC GCAACAGGGT CTCCCGCGAC
ATAGCCGACA TGAAAAAATC CGGGAGCGGC CCTGCCGATG AGCTTATCGG AAAAATGAAA
TCGGTCGCCG AAAATATTGC TGCAAGCGAC ACGTCCCTCA AAAACCTTGA ATCTGCAATC
GAGGAGATCC TGCTGACGCT TCCCAACAGA CTGCACAACT CCGTACCCGT CGGCAAAAGC
GCGGAAGAGA ACGTTATCCT TAAAGAACAG GGGGGATTTG ACTATCCGCT TGACTTTCCT
CTGAAAAATC ATACCGAGCT CGGAAAATCA CTCGGCATCC TCGACTTCGA ACGGGGAGCC
AAAGTCGGTG GCGCAGGATT TCCTGTCTAT ACCGGTAAAG GAGCGAGACT GGAACGTTCG
CTCATCAATT TCATGCTCGA CACGCACACC TCCGGTCACG GCTATACCGA AATCTTTCCG
CCGTTCCTTG TCAACCGCGA ATCGCTCAGG GGTACAGGGC AGTGGCCTAA ATTTGCCGAC
CAGGTCTATA CCATCGAGGA AGACGGACTC TACGCCATTC CGACCGCCGA AGTACCCGTA
ACCAACCTGC ATCGCGGAGA AATGCTCGAT GCGGCAGACC TTCCTATAGC CTATGCCGCA
TACTCGGCAT GTTTCAGAAG AGAGGCCGGC AGCTATGGAA AGGACACCAG AGGATTTCTG
AGGGTTCACC AGTTCAACAA GGTTGAAATG GTCCGCTTTA CCCGACCTGA AGTTTCATAC
GAGGCTCTCG AAGAGATCCG GCAGCACGCC GAGGCTATTC TTCTGGCGCT GAAAATACCA
TACAGGGTGC TGCTGCTCTG CAGCGGCGAT ATCAGTGCAA ACGCGACCAA ATGTTACGAC
ATAGAGGTCT GGTCGCCTGC CGAAGACAAA TATCTCGAAG CATCGAGCTG TTCCAACTTC
GAGGACTACC AGGCCCGTCG CATGAACATC CGCTACCGAC CCGACGGCAA ATCCCGGCCG
GAATTCGTGC ACACCCTCAA CGGCTCCGGG CTTGCCACCT CACGCCTCAT GGTCTCGCTG
CTCGAACACA ACCAGACCCC TGAAGGCAAG GTTATCGTTC CCGAAGTACT CAGACCCTAC
ACCGGATTCG ACATCATCGG CTGA
 
Protein sequence
MLDITYIRQN QDDVTAMLRN RLLESEIPRV AELLGLDRQR RELVQQADDM KALRNRVSRD 
IADMKKSGSG PADELIGKMK SVAENIAASD TSLKNLESAI EEILLTLPNR LHNSVPVGKS
AEENVILKEQ GGFDYPLDFP LKNHTELGKS LGILDFERGA KVGGAGFPVY TGKGARLERS
LINFMLDTHT SGHGYTEIFP PFLVNRESLR GTGQWPKFAD QVYTIEEDGL YAIPTAEVPV
TNLHRGEMLD AADLPIAYAA YSACFRREAG SYGKDTRGFL RVHQFNKVEM VRFTRPEVSY
EALEEIRQHA EAILLALKIP YRVLLLCSGD ISANATKCYD IEVWSPAEDK YLEASSCSNF
EDYQARRMNI RYRPDGKSRP EFVHTLNGSG LATSRLMVSL LEHNQTPEGK VIVPEVLRPY
TGFDIIG