Gene Clim_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1820 
Symbol 
ID6355160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1996357 
End bp1997088 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content52% 
IMG OID642669423 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001943838 
Protein GI189347309 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACATA TCATCCTTAT CACCGGCGCC GGCAAAGGTA TCGGAAAAGC AATCGCCCTT 
GAATTTGCCC GATACGCCGA GCGAAACCCA TCATTCGAGC CGGTACTGGT ACTCGCATCG
AGAACCCCCG GAGATCTTGA AGCGACTGCA GCCGAGTGCC GGAACTCAGG AGCGGAAACC
GATTGTATAA CAACGGACAT CGCCGATGCC GCAAATGCCC TGCATCTGGG TGAAACGGTC
GTTGAGAGGT ACGGAACTGT CGATTGTCTG GTCAACAATG CAGGCGTAGG GCGTTTCAAA
CCCTTCGCCG AGCTCACCGA AGAGGATTTT GACTACACCG TCGCAACCAA CCTCAAAGGC
ACCTTTTTTC TCACCCAGAA ACTTTTCCCT GTTATGGAAA AGCAGAAAAA AGGACATATT
TTTTTCGTCA CCTCCATAGC AGCCGAAAAA GCCTTCAAGA CATCCTCCAT CTACTGCATG
ACGAAATTTG CACAAAAAGG GTTGCTCGAA GCGCTCCGCC TCTACGCCAG AGAGTGCAAT
GTCCGTATCA CCAACGTCAT GCCGGGAGCG GTTTATACCC CCATGTGGGG AGAAGTACCC
GAAGAAATGC AGGCGATGAT GATGATGCCT GAAGACATTG CCGCCGCTGT TTCAGGAGCC
TATTTTCTGC CGCAAAGAAC ATCGGTGGAG GAACTTGTCA TACGTCCGGT CGGAGGAGAT
ATCAATGAAT GA
 
Protein sequence
MRHIILITGA GKGIGKAIAL EFARYAERNP SFEPVLVLAS RTPGDLEATA AECRNSGAET 
DCITTDIADA ANALHLGETV VERYGTVDCL VNNAGVGRFK PFAELTEEDF DYTVATNLKG
TFFLTQKLFP VMEKQKKGHI FFVTSIAAEK AFKTSSIYCM TKFAQKGLLE ALRLYARECN
VRITNVMPGA VYTPMWGEVP EEMQAMMMMP EDIAAAVSGA YFLPQRTSVE ELVIRPVGGD
INE