Gene Clim_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1798 
Symbol 
ID6354627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1977510 
End bp1978016 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content52% 
IMG OID642669401 
Productlipoprotein signal peptidase 
Protein accessionYP_001943816 
Protein GI189347287 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.226903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGGT TTTTCACCTT TGCCTCCGTA GTTGTGCTTC TTGACCAGTT CACAAAAAAA 
CTTGCCGTCC TGTTTCTCCG CGACCGCGGC ACCGTCACCA TTATCCCGGA CTGGCTGAAA 
CTCACCTATG CCGAAAACAA CGGCATAGCG TTCGGAGTCG AATTCGCCTC CCAGGCGATC 
ATGATCCTGC TGGTAGGGAG CATATCGCTC ATGATAGCCC TCTACGTACT GAAATCAGGA 
AACCGCAAGA CCCTCTTTCT GCTTCCCTTT TCGCTCATTT TCGGGGGAGG CATCGGCAAC 
CTTATCGACC GGCTCACGGT CGGCAGGGTT ATCGACTTCA TCCATTTCGA CCTTTATCAG 
GGTACCATCA TGGGATCCTG GGTATCGCTC TGGCCGATAT TCAATGTAGC CGACTCCGCG 
ATCACCATCG GCGCATGCAT GCTTATACTC CTGCACAACA GGATTTTCCC CGAACCCGAT 
ACGAAAGCCG AAAACCATGT ACGTTGA
 
Protein sequence
MKWFFTFASV VVLLDQFTKK LAVLFLRDRG TVTIIPDWLK LTYAENNGIA FGVEFASQAI 
MILLVGSISL MIALYVLKSG NRKTLFLLPF SLIFGGGIGN LIDRLTVGRV IDFIHFDLYQ 
GTIMGSWVSL WPIFNVADSA ITIGACMLIL LHNRIFPEPD TKAENHVR