| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1797 |
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| Symbol | |
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| ID | 6354626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1976557 |
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| End bp | 1977444 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642669400 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001943815 |
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| Protein GI | 189347286 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.910555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCCT CAAAGCAAAT CCTCGGCCTT ATCGGCAGAA ATGTCGGATA CTCGTGGTCA
CCGCTTATCC ACAACACCGC ATGCGAGTTG CTCGGGCTTC CGTTTATCTA TACCATTTTC
AATATCGCCG AACCGCAACG GCTCGACGAT GCCCTTCGGG GAGCGAGGGC TCTCGGCATT
GCCGGTTTCA ACGTTACCAT TCCCTATAAA CAGGATGTCG TGCCCCTGCT TGACCATCTG
GCAGAGGAAG CCGCCTCCAT CCGGGCGGTT AACACCATTG TCAACATCGA CGGAAAATTG
ACCGGATACA ACACCGACAT CGAAGGCTTT GCCGCTCCCC TGCTTTCTTG CCGCGACAGC
ATTGCAGGCA TGCCTGTCTC CGTTTTCGGA TCGGGAGGAG CATCTCTGGC GGCCATCGAA
GCATTCAGGC GTTATTTTAA GCCCTCGATC ATCTATCTTT TTGTCAGAGA CCTTTTCAAG
GCGATTCGCA TGCTTGAAAG CTACGACCAT AAAGAGACCA TTTCGATCTG CCTCATCGAC
GATCTCCATG CAGGGAAAAA CAGCACAAGA GAGCACTTCG GAAGCAGCCG CGTCATTGTC
AATGCCACTC CAATCGGAAC CCGGGGAAGA ACCGGCGACG ACGTCAGCTG CATCGTGCCG
CTTGAAAAGA ATCTGCTGCA CGACAGCCAG ATCGTTTACG ATATGGTGTA CAATCCCCTC
CGCACTCCGC TGCTACGTGC AGCAGAGCTC GCCGGAGCGA AAACGATAAC GGGCATCGAA
ATGCTGATCG GGCAGGCTGC CCGCTCCTTT ACACTCTGGA CTGGCGAAAT CATGCCGGTT
GAGGAGGTCA GAACACAGCT GATCCGTCAC ATTGAAACGG GAACATAA
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| Protein sequence | MKPSKQILGL IGRNVGYSWS PLIHNTACEL LGLPFIYTIF NIAEPQRLDD ALRGARALGI
AGFNVTIPYK QDVVPLLDHL AEEAASIRAV NTIVNIDGKL TGYNTDIEGF AAPLLSCRDS
IAGMPVSVFG SGGASLAAIE AFRRYFKPSI IYLFVRDLFK AIRMLESYDH KETISICLID
DLHAGKNSTR EHFGSSRVIV NATPIGTRGR TGDDVSCIVP LEKNLLHDSQ IVYDMVYNPL
RTPLLRAAEL AGAKTITGIE MLIGQAARSF TLWTGEIMPV EEVRTQLIRH IETGT
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