Gene Clim_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1791 
Symbol 
ID6354620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1968133 
End bp1969383 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content54% 
IMG OID642669394 
Productcoenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein 
Protein accessionYP_001943809 
Protein GI189347280 
COG category[C] Energy production and conversion 
COG ID[COG1035] Coenzyme F420-reducing hydrogenase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.03312e-10 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCAC CACCGAAACT TGAAAATCCG AGATTTGACG AGCCGTTATG CAGCCGCTGC 
GGGCTCTGCA TGGGCAATGC ATGGGCAACA GCAGAGAGCC TGAAAAGCTG CGTATTCAAT
ACCGGATGGC TTGGAGCTCA TGAAGAGAGG CTGTTCGGCA GAACCAGAAA CATGCACGAT
GCCGATGAAC TGCGCTTCGG CATCTCTCGT GAACGCTTTA ACGCAGTCAT GAAAAAACCG
CTCGAAGGCG CTCAATGGAG CGGCATAATT ACCGCTATTT CAACGGAAGC GCTTCAGACA
GGTCTTGTTG ACGGGGTCGT AACCCTCCAG GGCACGACCT TTCAGCCGAA AGCGGTTCTG
GCAACAACTG CGGAAGAGAT TCATGCCGCA AGGGGCAATA AACCGGTGCT CTCTCCGGTG
CTTCAGGCAC TGCATACGGC CTGGAAAAAA AAGGTAAAAA AACTGCTGGT TGTCGGGGCA
TCATGCCATG TGCATGTTCT GAGAGACTTT GCCGCAACGC ACCCCTGGCT CGACGGCATC
GAACTGCTTG TCGTCGGCAT ACCCTGCACG GACAACCTCG AACCGGCCCA CCTGAAATGG
GTATTCCGCC ATATCAGCCG CTCTCCCGAT ACCGTGCTGA ACTTCGAATT CATGCAGGAC
TACAAGGTGC ACATCGTGCA CTCGACCGGA AAAGTCGAAA AGATTCCGTT TTTCAGTCTT
CCCGCCGCAG TACTCAAAGT CGGCGTCTTC TCGAACAGCT GCATGAGCTG CTTCGACTAC
ATCAACAGCC TCGCGGACAT TACCGTAGGA TATTTCGGAG CGCCCTATAC CGCTGACGGC
AAAGAGCAGT GGATTCTGAT TCGTACCGAT AAAGGAAAAA AACTGTTCGA TCTGGTAAAA
AACGATATCT CCGTCAGACC TGAAACCGGA AGCGGCGACA GCTTCGGAGC CGTCAAGGCA
TCCATACAAC CGACCATCGG GCCCATCCTG CAGCCGCACC TGCTTGGCGA CAGGCGCTCC
ATGCCGCTCT TTTTCGGCAA GCTGCTCAGC GCGCTCAAGG CAAAAAAAGG ACCCAGAGGC
ATCGAATTCG CCCGATACTC CATCGACATC CACGCACTGA GAAACTACTT CTTCGTCAGA
CATTACACCC CGGAACGACT CGACGTCCTC GTACCCGAGC ACATACGGCA TCTCGTGAAA
CTGTACAACG TTACCGATTT CGACGATCTG CCCCCCCACA GTGAAAAATA A
 
Protein sequence
MNPPPKLENP RFDEPLCSRC GLCMGNAWAT AESLKSCVFN TGWLGAHEER LFGRTRNMHD 
ADELRFGISR ERFNAVMKKP LEGAQWSGII TAISTEALQT GLVDGVVTLQ GTTFQPKAVL
ATTAEEIHAA RGNKPVLSPV LQALHTAWKK KVKKLLVVGA SCHVHVLRDF AATHPWLDGI
ELLVVGIPCT DNLEPAHLKW VFRHISRSPD TVLNFEFMQD YKVHIVHSTG KVEKIPFFSL
PAAVLKVGVF SNSCMSCFDY INSLADITVG YFGAPYTADG KEQWILIRTD KGKKLFDLVK
NDISVRPETG SGDSFGAVKA SIQPTIGPIL QPHLLGDRRS MPLFFGKLLS ALKAKKGPRG
IEFARYSIDI HALRNYFFVR HYTPERLDVL VPEHIRHLVK LYNVTDFDDL PPHSEK