Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1790 |
Symbol | |
ID | 6354619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1967444 |
End bp | 1967950 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642669393 |
Product | NUDIX hydrolase |
Protein accession | YP_001943808 |
Protein GI | 189347279 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000145412 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAGG TTACTCTCAG AGTCAGCGCT CTTTGCGTTC AGCATGATCG TGTGCTGCTT ATCGAGCATA AAAGTTTCGC TCCGGACGAT CCGGCCCTGC CCGACCGGTA CTGGATTCTT CCCGGCGGAG GCGTCGAGCG GGGTGAAACT GTCGATGAAG CGCTTAAACG GGAGATGATG GAAGAGACCG GGCTCGAATG CGAGGTTGGT CCGCTTTTGT TCATCAAGGA ACTCCTCTAT CCTTTTCCTG GGTCATGCCG GCCGGGAGGC AGGCATCATT CGGTTTCGCT CGGATTTCAT TGCAGGGTTA CGGGAGGAGA GCTGATAACG GGCAGAGATC CTGAATATGG CGACGATGAA CAGATGATCA TAGAGGTGAA GTGGGTTCCA TTCGATGAGC TGCATGGCTT CGAACTGTAT CCACCGTTTT TGAAGGAGTA TCTTTTTGCT CATCGCAACG GCAGTTTCAG CGATACGGTT CCGGAATTCT ATGATTCAAG CCGTTGA
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Protein sequence | MSKVTLRVSA LCVQHDRVLL IEHKSFAPDD PALPDRYWIL PGGGVERGET VDEALKREMM EETGLECEVG PLLFIKELLY PFPGSCRPGG RHHSVSLGFH CRVTGGELIT GRDPEYGDDE QMIIEVKWVP FDELHGFELY PPFLKEYLFA HRNGSFSDTV PEFYDSSR
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